Gene Smed_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0422 
Symbol 
ID5321256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp456479 
End bp457297 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID640789357 
Productinositol monophosphatase 
Protein accessionYP_001326114 
Protein GI150395647 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA CAGCCCATTC GATCGTGCCC GCCTGGGGCC AGGATCTCGA GCTCATTCTT 
GCGGCAGCAG TCGCGGCGGG TGACACGGCG CTCGGCTATT TTCGCAAGAC GCTGGACGTT
CGCTGGAAAA ATGAAGGACG CTCTCCCGTC AGCGAGGCCG ACCTTGCCGC CAACGACATC
CTCAAGAGTC GGCTGCTCTC TGCCCGGCCG GACTATGGCT GGCTTTCGGA GGAGACCGAC
GACGATGAAA GCCGTCTCCT TCGCGAGACT GTCTTCGTTG TCGATCCGAT CGACGGGACC
CGGGCCTTCA TCGCGGGGAA GGACCTCTGG TGCGTCAGCG TCGCCGTCGT TCATCGCGGA
CTTCCCGTGG CTGGCGTGCT CTATGCACCG TCCCTCGGCG AGATATTCCA GGCGACCCGC
GACGGCGAAG TGCGGAAGAA CGGCAAACCG ATCGCGGTGC GGGAGACGGC CTCGGGCGCG
GTGCTGAAGG TGGCAGCGGC CGAGGATATC ATGGGCAAGC TGGCTCTGCC CTATCGCAAG
ACGATGATGC GCGTATCACA TGTACCGTCG CTCGCCTATC GGCTTGCGAT GATCGCGGAC
GGCCGTATCG ACGGAACGAT CGTCAAGCGG AACTCGCATG ATTGGGATCT CGCGGCCGCC
GACCTCATTC TTTCGCGCGC CGGCGGCGCG CTTTGCGGTC TCGACAACGA GCCCTTGTTC
TACAATCGCC CGACCGTCAC CCACGGCGTT CTTGCCGCGG CATCGGGGGC GGCGCTACCG
GCCTTGCTGG CCGCTTCCAG GCCTCTTGAG CCCCATTGA
 
Protein sequence
MSETAHSIVP AWGQDLELIL AAAVAAGDTA LGYFRKTLDV RWKNEGRSPV SEADLAANDI 
LKSRLLSARP DYGWLSEETD DDESRLLRET VFVVDPIDGT RAFIAGKDLW CVSVAVVHRG
LPVAGVLYAP SLGEIFQATR DGEVRKNGKP IAVRETASGA VLKVAAAEDI MGKLALPYRK
TMMRVSHVPS LAYRLAMIAD GRIDGTIVKR NSHDWDLAAA DLILSRAGGA LCGLDNEPLF
YNRPTVTHGV LAAASGAALP ALLAASRPLE PH