Gene Smed_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0406 
Symbol 
ID5321240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp436224 
End bp436931 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID640789341 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001326098 
Protein GI150395631 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.157624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.164436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TTTCCTCCTT TCCGATCACG TCGCGCTGGC CGGCGAAAAA TCCCGATATC 
ATCCAGCTCT ATTCGCTTCC GACGCCGAAC GGCGTGAAGG TCTCCATTGC TCTCGAAGAA
TTGGGCCTGA CCTATGAGGC GCATCGCATT TCCTTCGATA CCAACGAGCA GAAGTCGCCC
GAATTCGTCT CCCTCAATCC GAACGGCCGC ATTCCGGCGA TCATCGATCC GAACGGGCCG
GACGGTAAGC CGATCGGCCT GTTCGAGTCG GGCGCGATCC TGATCTATCT CGCAGAAAAG
ACCGGCAAGC TCATTCCTGC GGATGCGGCC CGCCGTTATG AGACGCTGTC CTGGGTGATG
TTCCAGATGG GCGGCGTCGG ACCAATGTTC GGGCAGTTCG GCCATTTCTT CAAATTCGCG
GCCGACAAGG TCGCGAACAA TCCCTATCCC GTTCAGCGTT ACCGAGACGA AGCAAAACGT
CTTCTCGGCG TTCTCGAAGC GAGGCTCGAA GGCAGGCAAT GGCTGATGGG AGAGGAGTAC
ACGATCGCCG ATATCGCGAC CTATCCCTGG GTGGAGGGGG CACGCAAATT CTATGGTGGA
GCCGAGGTGC TCGACTATAA GAGCTTCCCG AAGGTCATGG CATGGGTGGA TCGCGGCCTG
GCGCGCCCGG CCACGCAGAA GGGCATGGAG ATCCCGCGCA AGGAGTGA
 
Protein sequence
MADLSSFPIT SRWPAKNPDI IQLYSLPTPN GVKVSIALEE LGLTYEAHRI SFDTNEQKSP 
EFVSLNPNGR IPAIIDPNGP DGKPIGLFES GAILIYLAEK TGKLIPADAA RRYETLSWVM
FQMGGVGPMF GQFGHFFKFA ADKVANNPYP VQRYRDEAKR LLGVLEARLE GRQWLMGEEY
TIADIATYPW VEGARKFYGG AEVLDYKSFP KVMAWVDRGL ARPATQKGME IPRKE