| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0403 |
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| Symbol | hisS |
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| ID | 5321237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 432749 |
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| End bp | 434272 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789338 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001326095 |
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| Protein GI | 150395628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.326468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0636459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TGAATGAAAA ACAGAAGAAA ACGCAGAAGC TCAGGGCGCG CTTGCCGCGT
GGTTTCGTAG ATCGTCCGGC CGCGGACATC CGCGCCGTGG ACGAGATGGT TTCGAAGATC
CGCGAGGTCT ATGAACGCTA CGGCTTCGAT CCGGTGGAAA CCCCGCTTTT TGAATATACT
GACGCGCTCG GAAAATTCCT GCCGGACAGC GACCGGCCGA ATGAAGGCGT CTTCTCGCTC
ACCGACGACG ACGACCAGTG GCTTAGTCTT CGCTACGACC TGACGGCGCC GCTGGCGCGC
CACGTGGCCG AGAATTTCAA CGAGATCCAG CTTCCCTACC GGACCTATCG CGCCGGCTAC
GTCTTCCGCA ACGAGAAGCC GGGGCCGGGC CGTTTCCGCC AGTTCATGCA GTTCGATGCC
GATACGGTGG GTGCCGCCGG CGTGCAGGCC GATGCCGAAA TGTGCATGAT GATGGCCGAC
ACGATGGAGG CGCTCGGCAT TGCCCGCGGC GACTACGTGA TCCGCGTCAA CAACCGCAAG
GTTCTCGACG GCGTTCTGGA GGCGATAGGT CTCGGCGGCG GCGAGCAGAT GAATACGCGC
CTGACGGTGC TGCGTGCCAT CGACAAGCTC GACAAATTCG GCCCGGAAGG CGTGCGGCTG
TTGCTGGGCG AAGGACGCAA GGACGAGAGC GGCGACTTCA CCAAGGGCGC CGGGCTCGAC
GATGAGCAGA TCGGCAAGAT CCTGTTCTTT GTCGGCATCA CCGACTATGC CGAGAGCGCG
GACGCGTTGG CGGCACTCGT CGCCGGGACG GCCCGGGGCG CCGAGGGCGT CAATGAGTTG
AACACGATCC GCAGCCTTGT GCTCAGCGCC GGCTACGAGG CGGACCGCAT CAAGATCGAC
CCCTCGGTCG TGCGTGGTCT GGAATATTAT ACGGGTCCCG TTTTCGAGGC GGAGTTGCAG
TTCGCCGTCA CCAACGAAAA GGGGGAGAAG GTCGTCTTCG GCTCCGTCGG CGGAGGCGGC
CGCTATGACG GTCTCGTGTC GCGCTTCATG GGACAGCCGG TGCCGGCGAC CGGCTTTTCG
ATCGGCGTGT CTCGGCTGAT GACGGCGCTC AAGAATCTGG GCAAACTGGG CGTAGAACAG
GTCACCGCGC CGGTCGTCGT TTGCGTCATG GACCGCGACA TCGAAAGCAT GGGGCGCTAC
CAGCGCTTTG TGCAGGATCT GCGTCATGCC GGCATCCGCG CCGAAATGTA CCAGGGCAAC
AAGAAGAACT TCGGCGACCA GCTCAAATAT GCCGATCGTC GCGGTTCGCC GATCGCTGTC
ATTCAGGGCG GCGACGAGCG CGCTTCCGGC GTCGTACAGA TCAAGGACCT GATCGAAGGC
AAGCGGCTCT CTGGCGAAAT CGAAGATAAT GTCGCTTGGC GCGAGGCGCG TGCCGCTCAG
ATTTCCGTCC CGGAAGGCGA ACTCGTCGTT AAGATTCGCG AAATTCTCGC GGACCAGGCC
GAGGACCGGA AAAGGGCGGG TTGA
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| Protein sequence | MLSMNEKQKK TQKLRARLPR GFVDRPAADI RAVDEMVSKI REVYERYGFD PVETPLFEYT
DALGKFLPDS DRPNEGVFSL TDDDDQWLSL RYDLTAPLAR HVAENFNEIQ LPYRTYRAGY
VFRNEKPGPG RFRQFMQFDA DTVGAAGVQA DAEMCMMMAD TMEALGIARG DYVIRVNNRK
VLDGVLEAIG LGGGEQMNTR LTVLRAIDKL DKFGPEGVRL LLGEGRKDES GDFTKGAGLD
DEQIGKILFF VGITDYAESA DALAALVAGT ARGAEGVNEL NTIRSLVLSA GYEADRIKID
PSVVRGLEYY TGPVFEAELQ FAVTNEKGEK VVFGSVGGGG RYDGLVSRFM GQPVPATGFS
IGVSRLMTAL KNLGKLGVEQ VTAPVVVCVM DRDIESMGRY QRFVQDLRHA GIRAEMYQGN
KKNFGDQLKY ADRRGSPIAV IQGGDERASG VVQIKDLIEG KRLSGEIEDN VAWREARAAQ
ISVPEGELVV KIREILADQA EDRKRAG
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