Gene Smed_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0398 
Symbol 
ID5321232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp427756 
End bp428496 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content62% 
IMG OID640789333 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001326090 
Protein GI150395623 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.177632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA AATCCCTTAT CCTTGCCGCG TGCTTTCTCA CGGTCTTCTC CGGGGCCGCA 
GGTGCGCAGG ATCGTTATCA AAATCGCCCG CCTGTCATCG TCAGCCCGGA TCTGACCGCC
CCCTGGGTGA TGCAGCTGAC CGGTGAGCGC GTGGTCTACC GCCAGCAAGT TCCCACAGCC
ACCCGAAAGC AGCAGGGACG GCGCGGGCTT GTTCGTCGTC CGGCCGATGC AGCCGCACAG
CAAGCCTCTA TCGCCCGCAG GCAGAAGCCG GCAAAATCGA GTATCGATCC GCAGTTCCTG
CCGCAGATGG TCGCTTACGC GACCAGGGAA AAGCCCGGGA CCATCGTCAT CGATACCAAC
AACCGCTTCC TCTATCTCGT CACCGGCAAG GGAGAAGCCC GGCGCTATGG CGTCGGAGTC
GGCAAACCGG GCTTCGAATG GGCCGGAGAG CACAGGATCA CGCGAAAGGC CGAGTGGCCA
GACTGGACGC CGCCGCAGGA GATGATCGCG CGCGAGGCAG CCCAAGGCCA CTATCTGCCG
GCCCGCATGG ACGGCGGTCC GCAAAATCCT CTCGGCGCCC GCGCCATGTA CCTAGGCTCG
ACGCTCTATC GCATCCACGG AACGAATGCT CCGTGGACGA TTGGCTACGG CGTTTCCTCC
GGATGTATTC GCATGCGCAA CGAGGACGTG GTCGATCTCT ACGAGAGGGT GAAAGTCGGG
ACAAAGGTCA TCGTGATATA G
 
Protein sequence
MLKKSLILAA CFLTVFSGAA GAQDRYQNRP PVIVSPDLTA PWVMQLTGER VVYRQQVPTA 
TRKQQGRRGL VRRPADAAAQ QASIARRQKP AKSSIDPQFL PQMVAYATRE KPGTIVIDTN
NRFLYLVTGK GEARRYGVGV GKPGFEWAGE HRITRKAEWP DWTPPQEMIA REAAQGHYLP
ARMDGGPQNP LGARAMYLGS TLYRIHGTNA PWTIGYGVSS GCIRMRNEDV VDLYERVKVG
TKVIVI