Gene Smed_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0397 
Symbol 
ID5321231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp426880 
End bp427566 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID640789332 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001326089 
Protein GI150395622 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.66713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.167161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTC ACGTCACGGG GATGGCCGTA CTCGCGGCCG CGGCTCTTCT TGCCGGAAAC 
GCCGCGGCAT TCAGCCCGGC AGATGTCGCC GGCGCGGGCG CCGAGCGTTC CGAAATCATA
CAGGTCGCGC AGCCGAAGAA ACCCCCGCAG AGATATTGGC GCACCAAGGT CCGCTTCCGC
ACGGACGAAG CTCCCGGCAC GATCATCGTC GATACCAACA GCAAGTATCT CTATTACATC
GACGGTCGGA ACCGCGCGAC GCGCTACGGC ATCGGCGTGG GCCGGGACGG CTTCGGCTGG
TCTGGTGTCG TGAAGGTTGG TCGGAAAGCC GAGTGGCCCA GCTGGACGCC GCCGGCCGAA
ATGCGCGTGC GCGAGAGAGC GAAGGGCAGG ATCCTGCCGA TCACGCAGCC GGGCGGCATC
GACAATCCGC TCGGCGCCCG TGCGCTCTAC CTCTACAAGG GCGGCCGAGA CACGATCTTC
CGTATCCATG GTACCAATCA GCCATGGACG ATCGGTCAGA ACATGTCGTC GGGCTGTATC
CGGATGATGA ACGAGGATGT CGAACACCTT TATGAGCGCG CCGGTATCGG CACGAAGGTC
ATCGTCATCG GCCCGGGCAG CAAGCCCGGA GACACCTATT TCGATGATCG CGGCGTCGAT
ATTTTCCGCA CGATTTTCGG TGGATGA
 
Protein sequence
MRLHVTGMAV LAAAALLAGN AAAFSPADVA GAGAERSEII QVAQPKKPPQ RYWRTKVRFR 
TDEAPGTIIV DTNSKYLYYI DGRNRATRYG IGVGRDGFGW SGVVKVGRKA EWPSWTPPAE
MRVRERAKGR ILPITQPGGI DNPLGARALY LYKGGRDTIF RIHGTNQPWT IGQNMSSGCI
RMMNEDVEHL YERAGIGTKV IVIGPGSKPG DTYFDDRGVD IFRTIFGG