Gene Smed_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0390 
Symbol 
ID5321224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp418612 
End bp419118 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content61% 
IMG OID640789325 
ProductNUDIX hydrolase 
Protein accessionYP_001326082 
Protein GI150395615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.402427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.791613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTTTC TGCACCGGCT AGCTTCTGAT GTGCAACTGA TGCTGCGCCG CCCGGCGCGA 
ATGCAATACG CGGCGCTGTG CTACCGGTTT ACGGCGAAAA CGAAGGCGCT GGAGATCCTG
GTGATCACCA GCCGCGATAC CGGCCGTTGG GTCATCCCCA AGGGATGGCC GATGCAGGGA
AAGCAGGCAC ACGAAGTCGC CGAGCGCGAG GCCTATGAGG AGGCTGGAGT GAAGGGCAAG
GTGCAGAGGG CCGCCGTCGG CGCATATGTC TACCAGAAGC GGATGGACCA CGGCCTCGAG
ATTTCCTGCA AGGTTCAGGT GCACGCCCTC GAAGTCGAGG CATTCTGCAA GAAATTCCCG
GAGAAAGGCA CCCGGCGGCT CGAATGGGTC GACTATAAGG AGGCGGCAAA GCGCGTTGCG
GAGCCCTCAC TGAAAGAGCT TATTCTCGAT TTCGGCAAAC GCGTCGACCC CGCCGCGGAG
CAGCGTCCGA AGGAACCCAG CAGCTGA
 
Protein sequence
MNFLHRLASD VQLMLRRPAR MQYAALCYRF TAKTKALEIL VITSRDTGRW VIPKGWPMQG 
KQAHEVAERE AYEEAGVKGK VQRAAVGAYV YQKRMDHGLE ISCKVQVHAL EVEAFCKKFP
EKGTRRLEWV DYKEAAKRVA EPSLKELILD FGKRVDPAAE QRPKEPSS