Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0381 |
Symbol | |
ID | 5321215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 408389 |
End bp | 409264 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789316 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001326073 |
Protein GI | 150395606 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAC CTGTCATTAC CCAGGCGATG ATCGATGCCT ATGACGAGTA TACGCATCTC ACCTTGGACC GCCGCCGCTT CATGGAGAAA CTGACGGCGC TTGCCGGGAC GGCTGCCGCC GCCGCTGCAA TCGCGCCGAT GCTGGCTGCC AACAGCGCCA AAGCCGAAAT AATCGCCGAA ACGGACGAGC GAATCAAAGG CGAGGACATC ACCTATCCTG GCGGCGATGG CAAAATGAAG GGTTATCTCG TGAAGCCCGC CGAAATGTCC GGCAAGCTTC CCGCCGTCAT CGTCATCCAC GAGAATCGCG GCCTCAATCC GCACATCAGA GACGTTGCAC GCCGCATGGC GCTCGAAGGT TTTCTGGCAC TTGCTCCCGA TTTCCTTTCG CCGGAGGGGG GAACCCCGGG CGATGAGGAC AAGGCGCGCG AGATGATCGG CGCGCTCGAT GCAAGCGCTA CGAATGCCAA CGCCGTCGCC ACAGTGGCCT TCCTGAAGGG TCATGCGGAA AGCACCGCCA ATGTGGGGGC GATCGGCTTT TGCTGGGGCG GCGGTCTCGT CAACAGGCTT GCCGTGAACG CGCCTGACCT CAAGGCCGGC GTCGCCTATT ACGGCGCCCA GCCGAAAGCC GAGGACGTGC CGAAGATCAA GGCTGCGCTG CTGCTGCATT ATGCCGGGCT CGATGAGCGC ATCAATGCCG GCATCGAGGC CTACCGCAAG GCGTTGACGG AAAACGGCAA GGACGCCACG ATTCACGTCT ATGAGGGCGT GAACCACGCT TTCAACAACG ACACCTCGGC AGCCCGTTAC GACAAGGAGG CGGCCGACCT TGCCTGGCAG CGGACCGTCG AATTCCTGAA GGCGAAGCTC GCTTAG
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Protein sequence | MNKPVITQAM IDAYDEYTHL TLDRRRFMEK LTALAGTAAA AAAIAPMLAA NSAKAEIIAE TDERIKGEDI TYPGGDGKMK GYLVKPAEMS GKLPAVIVIH ENRGLNPHIR DVARRMALEG FLALAPDFLS PEGGTPGDED KAREMIGALD ASATNANAVA TVAFLKGHAE STANVGAIGF CWGGGLVNRL AVNAPDLKAG VAYYGAQPKA EDVPKIKAAL LLHYAGLDER INAGIEAYRK ALTENGKDAT IHVYEGVNHA FNNDTSAARY DKEAADLAWQ RTVEFLKAKL A
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