Gene Smed_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0369 
Symbol 
ID5321202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp394056 
End bp394523 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID640789303 
ProductMarR family transcriptional regulator 
Protein accessionYP_001326061 
Protein GI150395594 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC GGCATAACGA CCCACCGCCG CTTCACGATC AGCTCTGCTA CGCAATCTAT 
ACCGCTGGCA TAGCTATCCA GCGTGCCTAC AAGCGGGTGC TCGACGAGTT GGGTTTGACA
TATCCGCAGT ACCTCGTGCT CAACGTTCTT TGGCGCGAAG ACGAGCAGAC GGTTGGTGCT
ATCGCCCATA CCCTCGCTCT GGAATCCAGC ACGCTTACGC CGCTTCTGAA GCGGCTGGAA
GCATCAGGCT TGCTGCGACG AACACGAAAT CTGAGCAATG AGCGGCAGGT TGTCGTTGCA
TTGACGAACG AGGGACGCGC GTTGCAGCAC AGGGCTGGCT GCCTCAGCGA CACATTGCTC
GCAACCTCGA CACAAACGCC CGAGGAGTTG GCATCCTTGA ATCGCGATGT CCGGCATCTT
CGCGACACCA TCTATTCACA GATCGGCGGC TGGGACGCAC CCGCCTGA
 
Protein sequence
MTKRHNDPPP LHDQLCYAIY TAGIAIQRAY KRVLDELGLT YPQYLVLNVL WREDEQTVGA 
IAHTLALESS TLTPLLKRLE ASGLLRRTRN LSNERQVVVA LTNEGRALQH RAGCLSDTLL
ATSTQTPEEL ASLNRDVRHL RDTIYSQIGG WDAPA