Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0363 |
Symbol | |
ID | 5321196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 386374 |
End bp | 387873 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789297 |
Product | hypothetical protein |
Protein accession | YP_001326055 |
Protein GI | 150395588 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.189152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACAT TTTCGTTTTT GATCGATGGG TTCGCACTGG CTATTCAGCC TGCGAACCTC ATCTACGCCG CCATTGGCGT TCTTATTGGA ACGGCCGTCG GTGTTCTCCC AGGTATTGGC CCGGCACTGA CGGTGGCACT TCTGCTTCCA GTTACCTTCA AGCTGGATCC CGGCGGCTCG ATCATCATGT TCGCCGGAAT TTACTATGGC GGAATGTACG GTGGTTCGAC CACGGCGATC CTGCTCAACG CGCCTGGCGA AAGCGCATCG GTCGTCACCG CGCTCGAGGG CAACAAGATG GCACGAGCCG GACGCGGTGG GCCGGCGCTC GCGACAGCAG CCATCGGTTC GTTCGTTGCC GCACTCGTTG CTACAGCCGG GCTGGCCGTT CTCGCACCGT ATCTCGTGAA GATTGCTGTC AAGTTCGGTC CCTGGGATTA TTTCGGTCTG ATGCTGATCG CGTTCGTGAC GGTATCGGCA ACGTTCGGGT CATCGCCGCT GCGGGGGCTC ACCAGTCTGG CCTTTGGCCT CTGGCTGGGA CTGATGGGCA TCGACCAGTT GACGGGCCAG GCTCGCCTGA CGTTCGGTGT TCCGGGACTG CTTGATGGCG TCGAGGTGAC AACGCTCGCC GTCGGTCTGT TCGCGATCGG TGAAGCCTTC TTCGTGGCGT CGCGTCATCT CTACAAGCCC GAGAAGCCTA TCCCGGTTAA GGGGTCGATC TGGATGACCA GAGAAGACTG GAAGCGGTCC TGGAAGCCAT GGCTTCGCGG TACGGTCATC GGCTTTCCGA TCGGCGCACT TCCGGCTGGC GGCGCCGAGA TTCCTACTTT CCTGAGCTAT ACGATCGAAC GCAAGCTGAG CAGCAAGCCG GAAGAGTTCG GCCGCGGGGC AATCGAAGGC GTCGCCGGTC CGGAAGCTGC GAACAATGCG TCCGCCGCCG GCACGCTGGT TCCGCTGCTG ACGCTTGGAT TACCGACGTC TGCCACGGCC GCCGTCATGC TCGCGGGCTT CCAGCAGTAC AACATCCAGC CGGGTCCCTT GCTGTTCACG CAGCATGCTG ACCTCGTCTG GGGACTGGTC GCCAGCCTGT TTATCGCCAA TGTCATGCTG CTTGTTCTCA ACCTGCCTTT GGTCGGAATT TGGGTGAAGC TCCTCAAAAT TCCGCTGCCC TGGCTCTATG CAGGCATCCT CGTGTTTGCT TCGATGGGCA CCCTTGCAGC GAACCCATCC GTGACGGAAC TGCTGCTGCT GACGGGATTC GGCGTCGTCG GATTTGTGAT GCGCCGCTAC GACTATCCCA TCGCTCCGGC GGTTGTCGGT CTGATCCTTG GCCCGCTTGC AGACAGCGCC TTGCGCCGCT CTCTGCAAAT GAGCCTTGGC GATCCGATGA TCCTGGTCCA GCATCCGAGT TCGGCCATCA TGATCGGCAT AGCCGTTGTT GCCTTGGTCG CTCCTTTTGT ATTCAGAGGC CTCGCGAAAT TCCGTCAAGA CGAGGATTGA
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Protein sequence | MDTFSFLIDG FALAIQPANL IYAAIGVLIG TAVGVLPGIG PALTVALLLP VTFKLDPGGS IIMFAGIYYG GMYGGSTTAI LLNAPGESAS VVTALEGNKM ARAGRGGPAL ATAAIGSFVA ALVATAGLAV LAPYLVKIAV KFGPWDYFGL MLIAFVTVSA TFGSSPLRGL TSLAFGLWLG LMGIDQLTGQ ARLTFGVPGL LDGVEVTTLA VGLFAIGEAF FVASRHLYKP EKPIPVKGSI WMTREDWKRS WKPWLRGTVI GFPIGALPAG GAEIPTFLSY TIERKLSSKP EEFGRGAIEG VAGPEAANNA SAAGTLVPLL TLGLPTSATA AVMLAGFQQY NIQPGPLLFT QHADLVWGLV ASLFIANVML LVLNLPLVGI WVKLLKIPLP WLYAGILVFA SMGTLAANPS VTELLLLTGF GVVGFVMRRY DYPIAPAVVG LILGPLADSA LRRSLQMSLG DPMILVQHPS SAIMIGIAVV ALVAPFVFRG LAKFRQDED
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