Gene Smed_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0363 
Symbol 
ID5321196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp386374 
End bp387873 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content60% 
IMG OID640789297 
Producthypothetical protein 
Protein accessionYP_001326055 
Protein GI150395588 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAT TTTCGTTTTT GATCGATGGG TTCGCACTGG CTATTCAGCC TGCGAACCTC 
ATCTACGCCG CCATTGGCGT TCTTATTGGA ACGGCCGTCG GTGTTCTCCC AGGTATTGGC
CCGGCACTGA CGGTGGCACT TCTGCTTCCA GTTACCTTCA AGCTGGATCC CGGCGGCTCG
ATCATCATGT TCGCCGGAAT TTACTATGGC GGAATGTACG GTGGTTCGAC CACGGCGATC
CTGCTCAACG CGCCTGGCGA AAGCGCATCG GTCGTCACCG CGCTCGAGGG CAACAAGATG
GCACGAGCCG GACGCGGTGG GCCGGCGCTC GCGACAGCAG CCATCGGTTC GTTCGTTGCC
GCACTCGTTG CTACAGCCGG GCTGGCCGTT CTCGCACCGT ATCTCGTGAA GATTGCTGTC
AAGTTCGGTC CCTGGGATTA TTTCGGTCTG ATGCTGATCG CGTTCGTGAC GGTATCGGCA
ACGTTCGGGT CATCGCCGCT GCGGGGGCTC ACCAGTCTGG CCTTTGGCCT CTGGCTGGGA
CTGATGGGCA TCGACCAGTT GACGGGCCAG GCTCGCCTGA CGTTCGGTGT TCCGGGACTG
CTTGATGGCG TCGAGGTGAC AACGCTCGCC GTCGGTCTGT TCGCGATCGG TGAAGCCTTC
TTCGTGGCGT CGCGTCATCT CTACAAGCCC GAGAAGCCTA TCCCGGTTAA GGGGTCGATC
TGGATGACCA GAGAAGACTG GAAGCGGTCC TGGAAGCCAT GGCTTCGCGG TACGGTCATC
GGCTTTCCGA TCGGCGCACT TCCGGCTGGC GGCGCCGAGA TTCCTACTTT CCTGAGCTAT
ACGATCGAAC GCAAGCTGAG CAGCAAGCCG GAAGAGTTCG GCCGCGGGGC AATCGAAGGC
GTCGCCGGTC CGGAAGCTGC GAACAATGCG TCCGCCGCCG GCACGCTGGT TCCGCTGCTG
ACGCTTGGAT TACCGACGTC TGCCACGGCC GCCGTCATGC TCGCGGGCTT CCAGCAGTAC
AACATCCAGC CGGGTCCCTT GCTGTTCACG CAGCATGCTG ACCTCGTCTG GGGACTGGTC
GCCAGCCTGT TTATCGCCAA TGTCATGCTG CTTGTTCTCA ACCTGCCTTT GGTCGGAATT
TGGGTGAAGC TCCTCAAAAT TCCGCTGCCC TGGCTCTATG CAGGCATCCT CGTGTTTGCT
TCGATGGGCA CCCTTGCAGC GAACCCATCC GTGACGGAAC TGCTGCTGCT GACGGGATTC
GGCGTCGTCG GATTTGTGAT GCGCCGCTAC GACTATCCCA TCGCTCCGGC GGTTGTCGGT
CTGATCCTTG GCCCGCTTGC AGACAGCGCC TTGCGCCGCT CTCTGCAAAT GAGCCTTGGC
GATCCGATGA TCCTGGTCCA GCATCCGAGT TCGGCCATCA TGATCGGCAT AGCCGTTGTT
GCCTTGGTCG CTCCTTTTGT ATTCAGAGGC CTCGCGAAAT TCCGTCAAGA CGAGGATTGA
 
Protein sequence
MDTFSFLIDG FALAIQPANL IYAAIGVLIG TAVGVLPGIG PALTVALLLP VTFKLDPGGS 
IIMFAGIYYG GMYGGSTTAI LLNAPGESAS VVTALEGNKM ARAGRGGPAL ATAAIGSFVA
ALVATAGLAV LAPYLVKIAV KFGPWDYFGL MLIAFVTVSA TFGSSPLRGL TSLAFGLWLG
LMGIDQLTGQ ARLTFGVPGL LDGVEVTTLA VGLFAIGEAF FVASRHLYKP EKPIPVKGSI
WMTREDWKRS WKPWLRGTVI GFPIGALPAG GAEIPTFLSY TIERKLSSKP EEFGRGAIEG
VAGPEAANNA SAAGTLVPLL TLGLPTSATA AVMLAGFQQY NIQPGPLLFT QHADLVWGLV
ASLFIANVML LVLNLPLVGI WVKLLKIPLP WLYAGILVFA SMGTLAANPS VTELLLLTGF
GVVGFVMRRY DYPIAPAVVG LILGPLADSA LRRSLQMSLG DPMILVQHPS SAIMIGIAVV
ALVAPFVFRG LAKFRQDED