Gene Smed_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0362 
Symbol 
ID5321195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp385890 
End bp386363 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID640789296 
Productputative tricarboxylic transport membrane protein 
Protein accessionYP_001326054 
Protein GI150395587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.190244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA AAACTCTTCG CATTCCCAAC CGTCCAACTG CGATGATCGC TGTCGTCCTG 
TTCGCCATCG CCTTCATCAC CTACTGGGAT GCAAGCCATA TGAAGGTGCG GGCAACCTAC
GGGATGAGCG CCAGCGCGGC GTCCTATTTC GTGGCGATCC TTTTTGTAGT TCTTGCCATC
GGTCACCTGA TCAGCGCCTT CAAGCCATCG GACATCGAAG TCGAGAGCGC AGACTGGATG
GCCGTCGGCT GGATCGGTTT TGCTCTTGCA GGGTTGATCG GATCGATCTG GCTTGGTGGC
GGTTTCATTC CAGGCTCGAC GCTTCTCTTC GCACTGACCG CGCGGGCGTT CGGCCGCAAG
GCCCTTCTCG TCGATCTATG TCTCGGGGCG GTCATCGGGG TGTTTGTCTT CCTTCTCTTC
AATAAGCTCC TGACGCTCGC GTTGCCGCAA GGCCCGCTTG AGCGGCTCTT CTGA
 
Protein sequence
MTQKTLRIPN RPTAMIAVVL FAIAFITYWD ASHMKVRATY GMSASAASYF VAILFVVLAI 
GHLISAFKPS DIEVESADWM AVGWIGFALA GLIGSIWLGG GFIPGSTLLF ALTARAFGRK
ALLVDLCLGA VIGVFVFLLF NKLLTLALPQ GPLERLF