Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0362 |
Symbol | |
ID | 5321195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 385890 |
End bp | 386363 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640789296 |
Product | putative tricarboxylic transport membrane protein |
Protein accession | YP_001326054 |
Protein GI | 150395587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.190244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGA AAACTCTTCG CATTCCCAAC CGTCCAACTG CGATGATCGC TGTCGTCCTG TTCGCCATCG CCTTCATCAC CTACTGGGAT GCAAGCCATA TGAAGGTGCG GGCAACCTAC GGGATGAGCG CCAGCGCGGC GTCCTATTTC GTGGCGATCC TTTTTGTAGT TCTTGCCATC GGTCACCTGA TCAGCGCCTT CAAGCCATCG GACATCGAAG TCGAGAGCGC AGACTGGATG GCCGTCGGCT GGATCGGTTT TGCTCTTGCA GGGTTGATCG GATCGATCTG GCTTGGTGGC GGTTTCATTC CAGGCTCGAC GCTTCTCTTC GCACTGACCG CGCGGGCGTT CGGCCGCAAG GCCCTTCTCG TCGATCTATG TCTCGGGGCG GTCATCGGGG TGTTTGTCTT CCTTCTCTTC AATAAGCTCC TGACGCTCGC GTTGCCGCAA GGCCCGCTTG AGCGGCTCTT CTGA
|
Protein sequence | MTQKTLRIPN RPTAMIAVVL FAIAFITYWD ASHMKVRATY GMSASAASYF VAILFVVLAI GHLISAFKPS DIEVESADWM AVGWIGFALA GLIGSIWLGG GFIPGSTLLF ALTARAFGRK ALLVDLCLGA VIGVFVFLLF NKLLTLALPQ GPLERLF
|
| |