Gene Smed_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0355 
Symbol 
ID5321188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp380277 
End bp380921 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID640789290 
Producthypothetical protein 
Protein accessionYP_001326048 
Protein GI150395581 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.902598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT CGAAAGCCGA AATTGTCAGG GAATATGGAC CTTTTCCCGG TACTGAACAG 
GTGCATGGCG TCACCTTCGA CGGCAGGCAC GTCTGGTTCG CCTCGGGCGA CCGGCTGAAC
GCACTCGACC CCGGAAGTGG ACAGACGGTG CGCTCCATCG ATGTTGCCGC CCATGCGGGA
ACCGCCTTCG ACGGTCAGCA CCTGTTCCAG ATCGCGGAGG ATCGCATCCA GAAGATCGAT
CCTGAGACCG GTCGCGTGCT TGCAACGATT CCGGCGCCTG CCGGGGGCGG TGATTCCGGC
CTTGCCTGGG CCGAAGGAAC GCTCTGGGTC GGCTGTTACC AGGGGCGCAA GATCCATCAG
GTCGATCCCG AAACCGGGCG GGTCCTTCGC ACCATCGAGT CCAACCGGGT CGTGACCGGT
GTCACCTGGG TTGACGGTGA GCTTTGGCAC GGCACCTGGG AAGGCGACGA GAGCGATGTG
CGGCGTCTGG ATCCGGATAC AGGAGAGGTG TTGGAGATGA TAGAAATGCC GTCGGGCACC
GGCGTTTCCG GTCTTGAATC CGACGGCGGC GACCGTTTCT TCTGTGGAGG AGGAAACAGC
GGAAAGGTCC GCGCGATCCG CAAGCCCGGC CGGATCTCCG CATAG
 
Protein sequence
MKRSKAEIVR EYGPFPGTEQ VHGVTFDGRH VWFASGDRLN ALDPGSGQTV RSIDVAAHAG 
TAFDGQHLFQ IAEDRIQKID PETGRVLATI PAPAGGGDSG LAWAEGTLWV GCYQGRKIHQ
VDPETGRVLR TIESNRVVTG VTWVDGELWH GTWEGDESDV RRLDPDTGEV LEMIEMPSGT
GVSGLESDGG DRFFCGGGNS GKVRAIRKPG RISA