| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0343 |
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| Symbol | |
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| ID | 5321176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 370334 |
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| End bp | 371293 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789278 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001326036 |
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| Protein GI | 150395569 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.158898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.129182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGG CTATTGCGAG ACTTTCTATC CTGCTTGCCG CCACGGCGAT TTCGGCAACC
GCCGCCTCGG CCTCGGACGA TATCAGCGTG TCGCTTGTGC TCGGCCAGCG CAATAGCGGG
TTTCATGAGG CGATCGCCTG CGGCGCCCGC GCCGCCGCCA AGGAACTGGG CGTGAAGGTC
AACATCCAGG CCGCACCGAC CTACTCGGCC TCCGAGCAGA TCCCGGTGCT GAACGCCGTC
ATGGCGACGA GCCCTTCTGC CATCGTGCTC GATCCGACGA GCTCGACCGC GCTGATCGCG
CCACTGATGG AGGCAGCCGC CAACGGCGCC AAGATCGTCG CCGTCGACAC CACGCTCGAC
GACCCGTCGG TGCTCTCCGC CGTGGTCGGA ACCGACAATG AAAGCGTCGG CCGCGAAACC
GCCAAGGCGC TCGCGAAGGC ACTCGACGGA AAGTCCGGCA AGGTGGCGCA GATCAACAGC
ATTCCCGGCA TTTCCACCGT CGATGCCCGG ATCAAGGGTT TCGAAGAAGA GATCAAGAAG
TATCCGAATC TCACCTATAT CGGCAACCAG TTTGCAAGTG AGGATATCCC GAAGGCACAG
CAGGCCTACG TGTCGCTCAT GAGCGCCAAC CCCGACCTCA TCGGCGTCGT CTCCCAATCG
AACAATCCCG CGATCGGCGT TGCCGGCGGC ATCCGTTCCA CCGAGACGGC CGAGAGCGTC
GTCGCTATTG CGGTGGATGC CGATGAAGCC GAGATCGAGG CTCTGAATGA GGGGCTGCTC
GACGCTCTCG TCATCCAGCA GCCCTACGAA ATGGGCTATG TCGGCTTCAA GCAGGCCGTC
GCTGCCGTCA AGGGCGAGCC CGTCGAGACG CCGATCGGCA CCGGCACGGT AACCGCGACC
AAGGCGAATA TTGCCGACCC GGACGTGGCC AAATACCTTT ACGAAGGGAA TTGCATCTGA
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| Protein sequence | MTKAIARLSI LLAATAISAT AASASDDISV SLVLGQRNSG FHEAIACGAR AAAKELGVKV
NIQAAPTYSA SEQIPVLNAV MATSPSAIVL DPTSSTALIA PLMEAAANGA KIVAVDTTLD
DPSVLSAVVG TDNESVGRET AKALAKALDG KSGKVAQINS IPGISTVDAR IKGFEEEIKK
YPNLTYIGNQ FASEDIPKAQ QAYVSLMSAN PDLIGVVSQS NNPAIGVAGG IRSTETAESV
VAIAVDADEA EIEALNEGLL DALVIQQPYE MGYVGFKQAV AAVKGEPVET PIGTGTVTAT
KANIADPDVA KYLYEGNCI
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