| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0337 |
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| Symbol | |
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| ID | 5321170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 366319 |
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| End bp | 367116 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789272 |
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| Product | two-component response regulator |
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| Protein accession | YP_001326030 |
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| Protein GI | 150395563 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.101907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTTT CCACAAGGAT TGCACCCCAT CTCCCCTATC TTCGGCGCTA TGCGCGCGCC
GTCACAGGCT CGCAAGCAGC CGGCGACGCC TATGTCGCTG CAGTGCTCGA AGCGTTGATC
GACGATATAG GACTTTTCCC CTCCACGTCC AATGATCGCA CCAGCCTTTA CAAGCTGTTC
TGTTCCTTGT TCGGACAACT CAAGATCGAT CGGACACAGC TCGCCTCGCC TTTCGCATGG
GAGCAGAGGG CTGCGTCCAA CCTCTCGCTT ATCGCGCCCC CTCAGCGGCA GGCTTTCCTG
CTCGTCGCGC TCGAAGGTTT CTCGAATGGC GAGGCAGCCG AAATCATGGG ACTAGACGCA
AGCGCCTTTG CGAAATTGCT GACCAGCGCC TCGGAGGAGA TCTCGCGTCA GATCGCGACC
GACGTCATGA TCATCGAGGA TGAACCTCTG ATCGCACTCG ACATCGAGGA CATGGTAACC
AGCCTCGGTC ATCGGGTCAC CGGGATCGCC CGCACGCACG GCGAGGCGCT TAGTTTGTAT
CGCAAGACAT CGCCGAAGAT GGTGCTGGCG GACATACAGC TGGCCGACGG CAGTTCCGGC
ATCGACGCAG TCAACGACAT CCTGACGCAG GCTGCCGTTC CCGTCATTTT CATCACCGCC
TTCCCCGAAC GACTGCTGAC CGGCAAGAAA CCGGAGCCTG CCTTTCTGGT GACCAAGCCC
TTCAACCCGG ATACCGTGAA GGCGCTGATC AGCCAGGCCC TTTTCTTCGA CGAGCATGCG
CAGGCCGGAA CGTATTAG
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| Protein sequence | MPLSTRIAPH LPYLRRYARA VTGSQAAGDA YVAAVLEALI DDIGLFPSTS NDRTSLYKLF
CSLFGQLKID RTQLASPFAW EQRAASNLSL IAPPQRQAFL LVALEGFSNG EAAEIMGLDA
SAFAKLLTSA SEEISRQIAT DVMIIEDEPL IALDIEDMVT SLGHRVTGIA RTHGEALSLY
RKTSPKMVLA DIQLADGSSG IDAVNDILTQ AAVPVIFITA FPERLLTGKK PEPAFLVTKP
FNPDTVKALI SQALFFDEHA QAGTY
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