Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0331 |
Symbol | |
ID | 5321164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 361683 |
End bp | 362591 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789266 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001326024 |
Protein GI | 150395557 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.878588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0471149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG CTACCGCAAC CACCGCCATA TCGGCCGATC CGACGCGCCG GGCGCGCCTC GCCGAATTCT GGTATTATTT CTCGGAGAAC CGCGGCGCCG TCTTCGGCCT GTTCTTCTTC CTGTTCCTGG TGCTGCTCGC CATCTTCGCA CCGCTCGTGG CGCCGCATAA CCCGACCATC CAGTTCGGCG ACGCGCGACT GGTCCCGCCG GTCTGGCAGG AAGGTGGCCG CGCGACATTC CTGCTCGGCA CCGATGCCGT CGGCCGCGAC ATGCTCTCCC GTCTCATTTA TGGAACACGC TTCTCACTCT TTATCGGCGT TATCGTTACG GTCTTGTCTT TGACCGGCGG CATTCTGGTC GGCGTCATCG CCGGTTATTT CCGCGGATGG ATCGACACGG TCATCATGCG GCTGATGGAC ATCATCCTGG CTTTCCCGTC GCTCCTTCTG GCGCTTGTCC TCGTGGCGGT GCTGGGACCT GGCCTTACCA ATGCGATGAT CGCGATCGCA CTGGTCTTCC AGCCGCATTT CGTCCGTCTG ACCCGAGCGG CGGTGATGAC GGAGAAGACG CGCGATTACG TCGTGGCGGC GAAGGTCGCC GGAGCAGGCC ATGCGAGGCT CATGTTCAAG ACGATCCTGC CGAACTGCAT GGCGCCGCTC ATCGTTCAGG CGACGCTGTC TTTCTCGAAC GCGATCCTCG ACGCGGCGGC GCTCGGCTTC CTGGGCATGG GGGCGCAGCC GCCGACGCCG GAATGGGGAA CCATGCTTGC GGAAGCACGC GAGTTCATCC TGCGTGCCTG GTGGGTCGTC ACGCTTCCGG GCCTCGCCAT CCTGGTGACC GTCCTGGCCA TCAATCTGAT GGGCGATGGC CTGCGCGACG CTCTCGATCC GAAGCTGAAG AGGTCCTGA
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Protein sequence | MTEATATTAI SADPTRRARL AEFWYYFSEN RGAVFGLFFF LFLVLLAIFA PLVAPHNPTI QFGDARLVPP VWQEGGRATF LLGTDAVGRD MLSRLIYGTR FSLFIGVIVT VLSLTGGILV GVIAGYFRGW IDTVIMRLMD IILAFPSLLL ALVLVAVLGP GLTNAMIAIA LVFQPHFVRL TRAAVMTEKT RDYVVAAKVA GAGHARLMFK TILPNCMAPL IVQATLSFSN AILDAAALGF LGMGAQPPTP EWGTMLAEAR EFILRAWWVV TLPGLAILVT VLAINLMGDG LRDALDPKLK RS
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