Gene Smed_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0319 
Symbol 
ID5321151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp348029 
End bp348475 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID640789253 
Productphasin 
Protein accessionYP_001326012 
Protein GI150395545 
COG category[S] Function unknown 
COG ID[COG5490] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01985] phasin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.977242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.386124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA AGAAGACCGA AGACGCATTT TCCCTCGCTT TCGACCCGAG CAACTTTACC 
GACAGTTTCC GCGAGTTCGC CGAAAAGGGT GCCGCACAGT CGAAGGAAGC CTATGCCAAG
ATGAAGACCG CTACCGAAGA GGCAGCCAGG ACAGTCGAGG CGACGGTCGA GAGCGCTCAG
TCGGGCACGG TCGAACTGGG GCTCAAGGCC ATCGACGCGC TGCGCGCCAA TGCCGAGACC
TCGCTCTCGC ACATGGAAGC TCTGCTCGGC GTAAAATCGT TCTCCGAACT CGTCGAACTC
CAGACGGCCT TCATCCGCAG GCAGGCCGAG CTTGCTGTCG AGCAGGCGAA GACCATGCAG
GAAGCAACGC GCAAGGTCGC CGAGAACGTC ACCAAGCCCG GCAAGGAAGC CGCGGAACGG
GCGATGTCCA ACCTCAAGAA GAGCTGA
 
Protein sequence
MATKKTEDAF SLAFDPSNFT DSFREFAEKG AAQSKEAYAK MKTATEEAAR TVEATVESAQ 
SGTVELGLKA IDALRANAET SLSHMEALLG VKSFSELVEL QTAFIRRQAE LAVEQAKTMQ
EATRKVAENV TKPGKEAAER AMSNLKKS