| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0308 |
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| Symbol | |
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| ID | 5321140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 330900 |
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| End bp | 332189 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789243 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001326002 |
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| Protein GI | 150395535 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGATT TTTACAAGCT CGTTCCAAAC GCGCCGGAAG GACGCTTCGA TGGAATCGAG
CGGCCCTATT CCGCGGAGGA CGTGAAGCGG CTCAGGGGTT CGGTGGAGAT CCGTTATTCG
CTTGCCGAAA TGGGTGCGAA CCGCTTGTGG AAGCTCATTC ACGAGGAAGA CTTCGTCAAC
GCGCTCGGAG CGCTCTCGGG CAACCAGGCG ATGCAGATGG TACGCGCGGG GTTGAAGGCG
ATCTATCTCT CCGGCTGGCA GGTCGCGGCC GACGCGAACA CCGCTTCCGC CATGTATCCG
GATCAGTCGC TCTATCCCGC CAATGCTGCC CCGGAACTCG CCAAGCGCAT CAATCGCACA
CTTCAGCGCG CCGATCAGAT CGAGACCGCG GAAGGCAAGG GTCTCTCCGT CGACACCTGG
TTCGCACCCA TCGTCGCCGA TGCGGAAGCA GGCTTCGGTG GCCCGCTCAA CGCCTTCGAG
ATCATGAAGG CCTTCATCGA GGCAGGCGCC GCTGGCGTCC ACTACGAAGA TCAGCTCGCA
TCCGAAAAGA AGTGCGGGCA TCTCGGGGGC AAGGTGCTGA TCCCTACTGC GGCCCACATC
CGCAACCTGA ACGCCGCGCG GCTTGCCGCC GATGTCATGG GAACTCCGAC GCTCGTCATC
GCCCGCACCG ACGCGGAGGC GGCGAAGCTG CTCACCTCCG ATATCGACGA GCGGGACCGC
CCCTTCGTCG ATATCGATGC CGGCCGTACG GTGGAAGGCT TCTATCAGGT GAGGAACGGT
ATTGAACCCT GTATCGCCCG CGCAATTGCC TATGCACCGC ATTGCGACCT TATCTGGTGT
GAAACCTCCA AGCCGGATCT TGAGCAGGCG CGGAAATTTG CAGAGGGTGT TCACAAGGCG
TATCCGGGCA AGCTGCTCGC CTATAACTGC TCGCCATCCT TCAACTGGAA GAAGAATCTC
GACGACGCGA CCATAGCGAA GTTCCAGCGA GAGCTCGGCG CGATGGGCTA CAAGTTCCAG
TTCATCACGC TCGCCGGCTT CCACCAGCTG AACTACGGCA TGTTCGAGCT GGCTCGGGGC
TACAAGGACC GTCAGATGGC GGCCTATTCG GAACTTCAGG AAGCCGAATT CGCGGCAGAG
GCCAACGGCT ATACGGCGAC TAAGCACCAG CGCGAAGTCG GCACAGGCTA TTTCGACGCC
GTGTCGGTTG CGATCACGGG CGGACAGTCC TCGACCACCG CCATGAAGGA ATCCACCGAG
CACGACCAGT TCCGCCCGGC GGCAGAATGA
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| Protein sequence | MTDFYKLVPN APEGRFDGIE RPYSAEDVKR LRGSVEIRYS LAEMGANRLW KLIHEEDFVN
ALGALSGNQA MQMVRAGLKA IYLSGWQVAA DANTASAMYP DQSLYPANAA PELAKRINRT
LQRADQIETA EGKGLSVDTW FAPIVADAEA GFGGPLNAFE IMKAFIEAGA AGVHYEDQLA
SEKKCGHLGG KVLIPTAAHI RNLNAARLAA DVMGTPTLVI ARTDAEAAKL LTSDIDERDR
PFVDIDAGRT VEGFYQVRNG IEPCIARAIA YAPHCDLIWC ETSKPDLEQA RKFAEGVHKA
YPGKLLAYNC SPSFNWKKNL DDATIAKFQR ELGAMGYKFQ FITLAGFHQL NYGMFELARG
YKDRQMAAYS ELQEAEFAAE ANGYTATKHQ REVGTGYFDA VSVAITGGQS STTAMKESTE
HDQFRPAAE
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