| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0298 |
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| Symbol | |
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| ID | 5321130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 317540 |
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| End bp | 319360 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789233 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001325992 |
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| Protein GI | 150395525 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG ATTCCCGCAT AGCCGCCATT ACCGCACGCA TCGTCGAACG CTCAAAGCCC
TACCGGGAGC CCTATATTGA CCGTGTACGC GGGGCCGCAG CGAACGGGCC GCACCGCACG
GTGCTCGGCT GCGGCAACCT CGCGCATGGA TTTGCGGTCT GTTCCCCCGC CGAGAAGGTG
GCGCTTGCGG GCGACCGCGT GGCAAATCTC GGCATCATCA CCTCCTACAA CGACATGCTT
TCGGCGCATC AGCCGTTCGA AACCTATCCG GCGCTGATCC GTGAGGCCGC GCACGAGGCC
GGCGGTGTCG CGCAGGTCGC CGGCGGTGTG CCGGCCATGT GCGACGGCGT CACCCAGGGG
CAGCCCGGCA TGGAGCTGTC GCTCTTCTCG CGCGATGTCA TCGCCATGGC GGCCGGCATC
GGCCTGTCGC ACAACATGTT CGACGCGGCC GTCTATCTCG GCGTCTGCGA CAAGATCGTA
CCCGGGCTTG CGATCGCCGC GCTCACCTTC GGCCATCTGC CGGCGGTCTT CATTCCCGCC
GGGCCGATGA CCTCAGGCCT GCCGAACGAC GAGAAGGCCA AGATCCGGCA GCTCTTCGCC
GAGGGCAAGG TCGGCCGCGA CGAATTGCTG GAGGCGGAGT CCAAATCCTA TCACGGCCCC
GGCACCTGTA CCTTCTACGG CACCGCCAAT TCCAATCAGA TGCTGATGGA AATCATGGGC
TTCCACTTGC CCGGCGCTTC CTTCATCAAT CCCGGCACGC CGCTTCGCGA CGCGCTGACC
AAGGAAGCCA CGAAGCGGGC GCTTGCGATC ACGGCGCTGG GCAACGAATT CACCCCGGCC
GGCGAGATGA TAGACGAGCG GTCGATCGTC AACGGCGTCG TCGGCCTGCA TGCGACCGGC
GGTTCCACGA ACCACACGCT GCACCTTGTC GCAATGGCTC GCGCAGCGGG CATCGTGCTG
ACCTGGCAGG ACATTTCGGA GCTTTCCGAC CTAGTGCCGC TGCTCGCGCG CGTCTATCCG
AACGGGCTGG CTGACGTGAA CCATTTCCAC GCCGCAGGCG GGATGGGTTT CATGATCGCT
CAGCTCCTCA GCAAAGGCTT GCTGCATGAC GACGTCCGCA CCGTCTACGG CCAGGGGCTC
AGTGCCTATG CCATCGACGT GAAGCTCGGC GAAAAAGGCA GCGTCAAACG CGAGCCGGCG
CCGGCTGTGA GCGCCGATCC GAAGGTCCTC GCAACCATCG ACCGTCCGTT CCAGCACACT
GGCGGCCTCA AGATGCTGAG CGGCAATATC GGCAAGGCGG TCATCAAGAT CTCCGCCGTC
AAACCGGAAA GCCATGTCAT CGAGGCGCCC GCCAAGATCT TCAACGGCCA GGGTGAACTC
AACGCCGCCT TCAAGGCGGG TAAGCTCGAA GGCGATTTCG TGGCTGTCGT GCGCTTTCAG
GGCCCCAAGG CCAATGGCAT GCCCGAACTG CACAAGCTGA CGACGGTGCT CGGGATCCTG
CAGGACCGCG GCCAGAAAGT TGCAATACTC ACCGACGGGC GCATGTCCGG CGCGTCCGGC
AAGGTTCCGG CGGCAATCCA TGTGACCCCG GAAGCGAAGG AAGGCGGTCC GATCGCGCGC
ATCCAGGAGG GCGACATCGT CCGCATCGAT GCGATCAAAG GCAAGATCGA GGTGCTCGTC
GAGGATATCG CGCTTAAGAC GCGCGTGCCG GCGCATATCG ATCTGTCCGA CAACGAGTTC
GGTATGGGCC GCGAACTCTT CGCTCCCTTC AGGCAGATCG CCGGTGCAGC CGACCGTGGC
GGAAGCGTGC TCTTCAATTA G
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| Protein sequence | MSADSRIAAI TARIVERSKP YREPYIDRVR GAAANGPHRT VLGCGNLAHG FAVCSPAEKV
ALAGDRVANL GIITSYNDML SAHQPFETYP ALIREAAHEA GGVAQVAGGV PAMCDGVTQG
QPGMELSLFS RDVIAMAAGI GLSHNMFDAA VYLGVCDKIV PGLAIAALTF GHLPAVFIPA
GPMTSGLPND EKAKIRQLFA EGKVGRDELL EAESKSYHGP GTCTFYGTAN SNQMLMEIMG
FHLPGASFIN PGTPLRDALT KEATKRALAI TALGNEFTPA GEMIDERSIV NGVVGLHATG
GSTNHTLHLV AMARAAGIVL TWQDISELSD LVPLLARVYP NGLADVNHFH AAGGMGFMIA
QLLSKGLLHD DVRTVYGQGL SAYAIDVKLG EKGSVKREPA PAVSADPKVL ATIDRPFQHT
GGLKMLSGNI GKAVIKISAV KPESHVIEAP AKIFNGQGEL NAAFKAGKLE GDFVAVVRFQ
GPKANGMPEL HKLTTVLGIL QDRGQKVAIL TDGRMSGASG KVPAAIHVTP EAKEGGPIAR
IQEGDIVRID AIKGKIEVLV EDIALKTRVP AHIDLSDNEF GMGRELFAPF RQIAGAADRG
GSVLFN
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