Gene Smed_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0290 
Symbol 
ID5321122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp308111 
End bp309010 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID640789225 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001325984 
Protein GI150395517 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.154774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG TGATTGATGG CAAGGATGTT GCTGCTTCGG TCATCGAAAC CGTAAAAACC 
GCCACCAGCA CGCTGGAACG CGAAACGGGC GTGCGCGCGG GCCTCGCGGT CGTCATTGTC
GGGGACGATC CGGCAAGCCA CACTTATGTT TCGGCGAAGA GCAGGATGGC CAAGGAATGC
GGCTTTCTGT CCGTCCAGCA TACGCTGCCG GAGGAGACGT CGCAGGAGGA ACTGGCGGCG
CTTGTCGCTC AGCTCAATGC GGACGCGGCC ATCCACGGCA TTCTCGTGCA ACTGCCTTTG
CCGAAGCATC TCCGATCGGA GCCGATCATC CAATCGATCC TCCCCGAGAA GGACGTCGAC
GGCCTGCATG TGGTCAATGC GGGCAAGCTT GCAACCGGCG ACCTCGAAGG TGGGCTGGTC
TCCTGCACGC CGGCCGGTGC GATGGTTTTC GTGCGCCGGA CGTATGGCGA CGACCTCTCC
GGACTCAGCG CGGTCGTGAT CGGCCGCTCC AACCTCTTCG GCAAGCCGAT GGGTGCCCTG
CTCCTCGCAG CCAATGCGAC GGTTACGACG GCGCATTCGC GCACCAAGAA CCTTCCGGAA
GTTTGCCGAA ATGCGGATAT TCTCGTTGCT GCGGTCGGTC GTCCGGAGAT GGTCAAGGCG
GACTGGGTCA AGCCCGGTGC GATGGTGATC GACGTCGGCA TCAACCGCGT TCCTGCGCCG
GAGCGAGGCG AGGGTAAGAC CAAGCTCGTC GGTGATGTCG CTTTCAAGGA GTGCGCCGAG
CTCGCAAGCG TGATTACGCC TGTGCCGGGC GGCGTCGGAC CCATGACGAT CGCCATGCTG
ATGGCGAATA CGATCATCGC CGCCCATCGC AAAGCCGGCC GTCGGCCGCC GAAGTTCTGA
 
Protein sequence
MTTVIDGKDV AASVIETVKT ATSTLERETG VRAGLAVVIV GDDPASHTYV SAKSRMAKEC 
GFLSVQHTLP EETSQEELAA LVAQLNADAA IHGILVQLPL PKHLRSEPII QSILPEKDVD
GLHVVNAGKL ATGDLEGGLV SCTPAGAMVF VRRTYGDDLS GLSAVVIGRS NLFGKPMGAL
LLAANATVTT AHSRTKNLPE VCRNADILVA AVGRPEMVKA DWVKPGAMVI DVGINRVPAP
ERGEGKTKLV GDVAFKECAE LASVITPVPG GVGPMTIAML MANTIIAAHR KAGRRPPKF