| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0267 |
|---|
| Symbol | |
|---|
| ID | 5321099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 287475 |
|---|
| End bp | 288662 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640789202 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_001325961 |
|---|
| Protein GI | 150395494 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA TTCTCACCAA TGTCGCAGCG ATGGCTGCAC TCCAGACCCT GCGCGGCATC
GACTCCAATA TGGAGGAAAC GCAGGCTCGG GTGTCCTCGG GCCTTCGCGT CGGAACAGCT
TCGGACAACG CTGCCTACTG GTCGATCGCC ACTACGATGC GTTCGGACAA TATGGCGCTT
TCCGCCGTTC AGGACGCGCT GGGCCTGGGC GCCGCAAAGG TCGACACAGC CTATGCCGGT
GTGGAGAATG CGGTCGAGGT CGTGAAGGAA ATTCGTGCCA AACTCGTCGC TGCGACCGAA
GACGGTGTCG ACAAGGCCAA GATTCAGGAA GAGATCGAAC AGCTCAAGCA ACAGCTGACG
AGCATTGCAA CGGCCGCTTC CTTCAGCGGC GAAAACTGGC TCCAGGCTGA CATCACCACG
CCTGTTACGA AGAGCGTAGT GGGTTCCTTT GTCCGCGACT CCTCAGGCGT CGTGTCCGTA
AAGACGATCG ACTATGTCCT CGACGGCAAC TCAGTCCTCT TCGATACGGT GGGCAATACC
GGCATTCTGG ACAAGGTCTA TGACGTGTCA GAGTCCAGCG TCACGCTTTC GATCAACACG
GGCGGCGTTG TTTCCGAGCA TACGGTCGCA GCCTATACCG TTGACGACCT CATCGCCGGC
GGCGCGGTAT TCCAGAACAA TTATGCGCTT GCGGGCGGCG TCAGCTATGT TCAGGTCGAA
GGCGCTTGGG TCAGAGCAGT GGCTTCCTCT ACGGTTCCCG GACAGGAGGT TGCTGCGGTG
ACGACGGCCG CAGCTCCCAT CACCGCCGAT TCCTGGATCG TAGACACGAC TGCTGGGCCG
GCAGCAAGTG TACCTGCACC CGCATCGGTC GAGAATATCG ACATCACCGA CGCTACCCAG
GCCGCAAACC TCGATGCCCT GATCAGGGGG GTCGACGAAG CGCTCGAGGA TCTGATCAGC
GCCACATCGG CTCTCGGATC GATCTCCATG CGCATCGGCA TGCAGGAAGA GTTCGTATCG
AAGCTCACCG ACTCGATCGA CTCGGGCATC GGCCGCCTCG TAGACGCCGA CATGAACGAG
GAATCGACCA GGCTCAAGGC GCTGCAGACG CAGCAGCAGC TCGCCATCCA GTCGCTGTCG
ATCGCCAACA CCAATTCGGA AAACATCCTC CAGCTCTTCC GTCAGTAA
|
|---|
| Protein sequence | MTSILTNVAA MAALQTLRGI DSNMEETQAR VSSGLRVGTA SDNAAYWSIA TTMRSDNMAL
SAVQDALGLG AAKVDTAYAG VENAVEVVKE IRAKLVAATE DGVDKAKIQE EIEQLKQQLT
SIATAASFSG ENWLQADITT PVTKSVVGSF VRDSSGVVSV KTIDYVLDGN SVLFDTVGNT
GILDKVYDVS ESSVTLSINT GGVVSEHTVA AYTVDDLIAG GAVFQNNYAL AGGVSYVQVE
GAWVRAVASS TVPGQEVAAV TTAAAPITAD SWIVDTTAGP AASVPAPASV ENIDITDATQ
AANLDALIRG VDEALEDLIS ATSALGSISM RIGMQEEFVS KLTDSIDSGI GRLVDADMNE
ESTRLKALQT QQQLAIQSLS IANTNSENIL QLFRQ
|
|---|
| |