Gene Smed_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0251 
Symbol 
ID5321083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp274499 
End bp275278 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID640789186 
Producthypothetical protein 
Protein accessionYP_001325945 
Protein GI150395478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00748902 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.467575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA CCTATACGAG CTACAAGCTG ATCACTGCCG ATCTCACGAA ATCGCTTGAG 
CGCGTTTCGG AGCAGCCGGA TGTTGCCCGT GAGACGGAAT ATTACCTTTC GAAGATCGGC
AGCATCAAAA CGCTCGACGA GTTCTTCGCC GACAGCCGGC TTTACGACTA CGCTATGAAG
GCGCACGGCC TCGAGGACAT GGCCTACGCC AAGGCGTTCA TGCGCAAGGT GCTTGGCGAA
GGCATAGACA GCGATGATGC CTTTGCCAAT AAACTGGCGG ACGGGCGCTA CAAGTCTCTG
GTCGAGTCGT TGAATTTCGC TCGGCACGGC GAAGCCGCCA CGTCCTTCGA GCGGGCGCAG
AAAGGCGTGG CCGAAAAATA CACTCGGCAG ACGCTGGAGC AGAAAGCCGG AGAAGAAAAC
ACCGGCGTGC GGCTTGCGCT CTATTTCCAG CGCATGGCGC CGACAATCGC CAATGGCTAT
GAAATCATTG CCGACGAGGC TCTCTCGCAT GTGGTCCGGA CCGTCCTGCA GCTGCCCGAG
GAATTCGCGG CCACCGACGT GGATCGCCAG GCGGCGGCCT ACGAGTCGGC GGTCGACCTC
AAGGATTTCC AGGACCCACA CAAGGTCGCC GAGTTTCTGG ACCGCTTCAC CGCCCTTTGG
GAGATCGACA ATTCTTCCGA CGGCTACGAT CCGCTTGCGG TTTTCGGCTC CTCCAGCGGA
TACGGAATTT CTCCCGACCT GCTTCTGACC ATCAACAATC TGAAACTCGG GGGACGCTGA
 
Protein sequence
MTTTYTSYKL ITADLTKSLE RVSEQPDVAR ETEYYLSKIG SIKTLDEFFA DSRLYDYAMK 
AHGLEDMAYA KAFMRKVLGE GIDSDDAFAN KLADGRYKSL VESLNFARHG EAATSFERAQ
KGVAEKYTRQ TLEQKAGEEN TGVRLALYFQ RMAPTIANGY EIIADEALSH VVRTVLQLPE
EFAATDVDRQ AAAYESAVDL KDFQDPHKVA EFLDRFTALW EIDNSSDGYD PLAVFGSSSG
YGISPDLLLT INNLKLGGR