Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0251 |
Symbol | |
ID | 5321083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 274499 |
End bp | 275278 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789186 |
Product | hypothetical protein |
Protein accession | YP_001325945 |
Protein GI | 150395478 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00748902 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.467575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGA CCTATACGAG CTACAAGCTG ATCACTGCCG ATCTCACGAA ATCGCTTGAG CGCGTTTCGG AGCAGCCGGA TGTTGCCCGT GAGACGGAAT ATTACCTTTC GAAGATCGGC AGCATCAAAA CGCTCGACGA GTTCTTCGCC GACAGCCGGC TTTACGACTA CGCTATGAAG GCGCACGGCC TCGAGGACAT GGCCTACGCC AAGGCGTTCA TGCGCAAGGT GCTTGGCGAA GGCATAGACA GCGATGATGC CTTTGCCAAT AAACTGGCGG ACGGGCGCTA CAAGTCTCTG GTCGAGTCGT TGAATTTCGC TCGGCACGGC GAAGCCGCCA CGTCCTTCGA GCGGGCGCAG AAAGGCGTGG CCGAAAAATA CACTCGGCAG ACGCTGGAGC AGAAAGCCGG AGAAGAAAAC ACCGGCGTGC GGCTTGCGCT CTATTTCCAG CGCATGGCGC CGACAATCGC CAATGGCTAT GAAATCATTG CCGACGAGGC TCTCTCGCAT GTGGTCCGGA CCGTCCTGCA GCTGCCCGAG GAATTCGCGG CCACCGACGT GGATCGCCAG GCGGCGGCCT ACGAGTCGGC GGTCGACCTC AAGGATTTCC AGGACCCACA CAAGGTCGCC GAGTTTCTGG ACCGCTTCAC CGCCCTTTGG GAGATCGACA ATTCTTCCGA CGGCTACGAT CCGCTTGCGG TTTTCGGCTC CTCCAGCGGA TACGGAATTT CTCCCGACCT GCTTCTGACC ATCAACAATC TGAAACTCGG GGGACGCTGA
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Protein sequence | MTTTYTSYKL ITADLTKSLE RVSEQPDVAR ETEYYLSKIG SIKTLDEFFA DSRLYDYAMK AHGLEDMAYA KAFMRKVLGE GIDSDDAFAN KLADGRYKSL VESLNFARHG EAATSFERAQ KGVAEKYTRQ TLEQKAGEEN TGVRLALYFQ RMAPTIANGY EIIADEALSH VVRTVLQLPE EFAATDVDRQ AAAYESAVDL KDFQDPHKVA EFLDRFTALW EIDNSSDGYD PLAVFGSSSG YGISPDLLLT INNLKLGGR
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