Gene Smed_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0250 
Symbol 
ID5321082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp273450 
End bp274328 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID640789185 
Productflagellar motor protein MotA 
Protein accessionYP_001325944 
Protein GI150395477 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0249106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.665085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCATCGGGCT TCTTGTGACT TTCGGCTGTA TCCTCGGCGG CTACATGGCC 
ATGGGCGGCC ACCTGGAAGT CCTGAACCAG CCTTTCGAGC TGATGATCAT AGGCGGGGCC
GGTATCGGCG GCTTCATCAT GGCGAACTCG ATGAAGGTGG TCAAAGACAC CGGCAAGGCG
CTCGTCGAAG CCTTCAAGCA CAAGGTGCCC AAGGAACGCC AATACCTCGA TACGCTCGGC
GTCCTCTACA GCCTGATGCG CGACCTGAGA ACAAAGTCGC GCAACGAAAT CGAGAGCCAC
ATCGACAACC CGGAAGATTC CTCGATCTTC CAGTCCGCGC CGACCGTTCT GCAGAACAAG
GAGCTGACCG CCTTCATCTG CGACTATGTG CGGCTGATCA TCATCGGTAA CGCCCGCTCG
CATGAGATCG AAGCTTTGAT GGACGAGGAA ATCCAGACGA TCACCCACGA CAAGATGAAG
TGCTACCACG CGCTGACGAG CATGGGCGAC GCGCTGCCGG CGATCGGTAT CGTCGCTGCG
GTCCTCGGCG TCATCAAGGC GATGGGCGCG ATCAGCGAGG CACCGGAAGT GCTGGGCGCC
AAGATCGCGG CCGCACTCGT CGGAACGCTG CTCGGCGTGT TCCTTTCCTA TTCGATCGTC
GGCCCTCTCG TCGCAAACAT CAAATCCGTT CGTGAAAAGC AGAACCGGCT CTATGTCATC
GTCAAGCAGA CGCTGCTTGC CTACATGAAC GGCTCGGTTC CGCAGGTCGC ACTCGAATAT
GGCCGCAAGA CCATCTCCGC CTATGAACGG CCGTCCATCG ACGCGGTCGA ACAGGAAATG
ATGAATCCAG GCGGCGGCAG CGAGAGCAAG GCAGCCTGA
 
Protein sequence
MNIIIGLLVT FGCILGGYMA MGGHLEVLNQ PFELMIIGGA GIGGFIMANS MKVVKDTGKA 
LVEAFKHKVP KERQYLDTLG VLYSLMRDLR TKSRNEIESH IDNPEDSSIF QSAPTVLQNK
ELTAFICDYV RLIIIGNARS HEIEALMDEE IQTITHDKMK CYHALTSMGD ALPAIGIVAA
VLGVIKAMGA ISEAPEVLGA KIAAALVGTL LGVFLSYSIV GPLVANIKSV REKQNRLYVI
VKQTLLAYMN GSVPQVALEY GRKTISAYER PSIDAVEQEM MNPGGGSESK AA