Gene Smed_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0239 
Symbol 
ID5321071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp263329 
End bp263718 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content60% 
IMG OID640789174 
Productresponse regulator receiver protein 
Protein accessionYP_001325933 
Protein GI150395466 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.82609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.256114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG CCGAAAAGAT AAAAGTTCTG ATCGTCGACG ATCAGGTCAC GAGCCGGCTG 
CTGTTGGGCG ATGCGCTCCA GCAACTGGGC TTCAAGCAGA TCACTGCGGC AGGTGACGGG
GAGCAGGGCC TGAAGATCAT GGCTCAGAAC CCGCATCATC TGGTGATCTC CGATTTCAAC
ATGCCGAAAA TGGACGGGCT CGGCCTGCTG CAGGCGGTGC GTGCGAACCC TGCCACGAAG
AAGGCGGCTT TCATCATTCT GACGGCGCAG GGTGACCGTG CACTGGTGCA GAAGGCGGCC
GCCCTCGGCG CCAACAACGT GCTGGCCAAG CCATTCACGA TCGAAAAGAT GAAGGCGGCG
ATCGAGGCCG TGTTCGGGGC GCTGAAATGA
 
Protein sequence
MSLAEKIKVL IVDDQVTSRL LLGDALQQLG FKQITAAGDG EQGLKIMAQN PHHLVISDFN 
MPKMDGLGLL QAVRANPATK KAAFIILTAQ GDRALVQKAA ALGANNVLAK PFTIEKMKAA
IEAVFGALK