Gene Smed_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0234 
Symbol 
ID5321066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp258226 
End bp258591 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content61% 
IMG OID640789169 
Productresponse regulator receiver protein 
Protein accessionYP_001325928 
Protein GI150395461 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.695764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.176079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA GAGTTCTGAC TGTCGACGAC TCCCGGACGA TCCGCAACAT GCTTCTCGCC 
ACCCTCAACA ATGCGGGATT CGAAACGATC CAGGCGGAGG ATGGCGTCGA GGGCCTCGAG
AAGCTCGACA CGGCCAACCC CGACGTCATC GTGACGGACA TCAATATGCC GCGTCTCGAC
GGTTTCGGAT TCATCGAGGG TGTGCGCAAG AACGACCGCT ACCGTGCAGT GCCGATCCTC
GTCCTGACGA CCGAGAGCGA TGCGGAAAAG AAGAACCGCG CGCGGCAGGC GGGTGCCACG
GGCTGGATCG TGAAACCGTT CGACCCGACC AAGCTGATCG ATGCCATCGA GCGCGTAACG
GCCTGA
 
Protein sequence
MKKRVLTVDD SRTIRNMLLA TLNNAGFETI QAEDGVEGLE KLDTANPDVI VTDINMPRLD 
GFGFIEGVRK NDRYRAVPIL VLTTESDAEK KNRARQAGAT GWIVKPFDPT KLIDAIERVT
A