Gene Smed_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0216 
Symbol 
ID5321048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp240867 
End bp241949 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID640789151 
Producthypothetical protein 
Protein accessionYP_001325910 
Protein GI150395443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.367954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.621214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC GTAGCTCCGG AAATCTTCTT GCGCTTGCAT CCTGCCTCAA TGGCAGGCCT 
CCGACCGGCG TCGATTGGGA GCAGGTCATC GCACTTGCGA ATGAAAGCCT GACGGTTGCT
TCCCTGGCGG TCGCGGCGAG AAAATACGCG GATGACATAC CAGAGGATGT CCGCCAATAC
CTATCGCTGA TCTACGACAG AAATGCGCAG CGCAATCGCA GATTGCTGGC GCAGCTGACG
GAGGCGGCAT CTTGTCTCAA TCGCATCGGC GTCGAGCCCG TCCTGATGAA GGGCGCGGCA
ATCCTGATCT CTCAGAAAAT GGACGAAATC GGAGCGCGGA TGCTGACGGA CCTGGACATT
CTCGTCCGCC CCGCCGATAT GGTCTCATCG ATCGGCGCGT TGAAGGACAT CGGATACGAG
GTTCGGCTTG CCGGGGGCAA CGGGTCCTGG CCGGGCAACC GCAAGTTTCA CCTGCCCGCC
GTGCTGGAGC GCCCGACGGA TGCGGGAAGT ATCGACCTTC AATGCCGGCC GAAGGGCCCA
GCCTCCTTCA GTGACATGGA ATGGCTGGAC GGGCACAGCC GCAAGGTCGA CCTTGATGGA
GGAAAGTTCC ATATACCGTC GGCTTTTGCC CAGATTGTTT TCCTGATCTT GCACGATCAG
TTCCAGGACG GGGACTACTG GCGCGGCCTG ATCGATCTGC GACACCTTCT CGATCTGTCG
AAGCTCGCAG CTTCGGAAGA TGTCGACTGG AAGCAGTTGA TGTCGCTTTT CGCCAGAGGA
TACGAGAGAA ATGCGGTTGA GACACAAATC CTGACGGCTG ACAAATTGTT CGGGATAAAT
GGTGCTCCCG ATTTGTCCGC CGGGAAGCTG CCGCGGTTTC AATTGCAAAG GCGATGGGTC
CAGCTCGGAA GGGATTATCT TTTCGTCCCC TCCACGGTTT TCACGCTCCT GAGCGAGCTT
TCCCACTACC GGTCCTGGGA CCGGTACGGC GGTGAGCCAT ATCCGTCGCG GCGTCAGGAG
GCGGGTCGCA AGATCCGCGA GCTGCGACGC GTATTCCGCC CGAGGGCGTC CGGAAAGATC
TAG
 
Protein sequence
MKARSSGNLL ALASCLNGRP PTGVDWEQVI ALANESLTVA SLAVAARKYA DDIPEDVRQY 
LSLIYDRNAQ RNRRLLAQLT EAASCLNRIG VEPVLMKGAA ILISQKMDEI GARMLTDLDI
LVRPADMVSS IGALKDIGYE VRLAGGNGSW PGNRKFHLPA VLERPTDAGS IDLQCRPKGP
ASFSDMEWLD GHSRKVDLDG GKFHIPSAFA QIVFLILHDQ FQDGDYWRGL IDLRHLLDLS
KLAASEDVDW KQLMSLFARG YERNAVETQI LTADKLFGIN GAPDLSAGKL PRFQLQRRWV
QLGRDYLFVP STVFTLLSEL SHYRSWDRYG GEPYPSRRQE AGRKIRELRR VFRPRASGKI