Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0215 |
Symbol | |
ID | 5321047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 239780 |
End bp | 240880 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789150 |
Product | HPr kinase |
Protein accession | YP_001325909 |
Protein GI | 150395442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.623305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC GCGTCTCCGA TGGGGCACGA TTTTTTCTGC TTGGACAACG CAAGACTATT TTCGTTGAAG CGTCGCAGCA GATTTTTGAG GTCGATGATC TCACGGCCTA TCTCACCTGC GTGCTCGCCG TGCCTGCGTC TCAGCGCCAG CTCGAAGTCG ATCTCGTCGC GCGTGGCGCC GAACGGGCCG AGGCCCGGAG ATCGGTGCGG GAATATCTTC ACTACTGGTG CCGCCATGGT CTGCTGGAGA TTGCCTTCGA CGCCGAGGAG GGGGAGCCGC TGCACACGCA TGTGCTTGAT TTACAGGGAG CTGCCGCCTC GATAGCCTAT CACGACAAAG GGCTCCTCGA TCTTCTCCTG CCCATATTCG GTCATCTGGC ATCACCGGGC CTCAAGCCTT CCGTCTCCTA TGGCGTGGCA AGGTTCGGCA GCCAAGCGTG CATCAGCCGC AACCGTTCCC CAGGCCGAAT CGTCCGGGTT GAAGAGGTGG CGCCGGTGCT GAAAGCGCTG CTGACGGAGG ATGTGCTGGC AAGCCTCGGC CCTGACGTCG CGCTTCACGC CGCTCTTCTG GTCAGGAACG CAAAGGGCCT TCTGATTTGC GGCGCGCCCG GGGCGGGCAA ATCGACGCTA ACGCTTGCGC TCCTCGAAGC AGGCTTTGCC TGCGGCGGTG ACGATATCAC GCTGATGAGG CCAGACGGCC TGCTTCAGGG CGTGCCCTTT GCACCCGCCC TGAAGCGCGG CTCCTGGCGC CTTCTCGAAA ACATGCGCGC TTCGGTCGAG GCGGCGCCGG TCCACCGTCG CCTCGACAAC AGACATGTCC GCTATCTCGC GTCGATCCCC TTCGCATCCG ACGATCCCGT CAAGCTCGGC ACTATCGTGC TTCTGCGCCG CCGCAAGGGA CGGGCGGCAA TTGCCGCCGT CGAGCCGGCG CGGGTTCTGT CGGAACTCTT TCGCGGCGCT TTCACTCCGG CACGCGGGCT CGGTCTGCCG CAATTCGACG CTTTGCTGAG TGCTGTCCGC GGCGCCAGCG CCATCGAGCT ATCCTATACG CGGCTGGATG AGGCCGTAGA GATGCTGAGC AGCCATCATG AAGGCGCGTA G
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Protein sequence | MKFRVSDGAR FFLLGQRKTI FVEASQQIFE VDDLTAYLTC VLAVPASQRQ LEVDLVARGA ERAEARRSVR EYLHYWCRHG LLEIAFDAEE GEPLHTHVLD LQGAAASIAY HDKGLLDLLL PIFGHLASPG LKPSVSYGVA RFGSQACISR NRSPGRIVRV EEVAPVLKAL LTEDVLASLG PDVALHAALL VRNAKGLLIC GAPGAGKSTL TLALLEAGFA CGGDDITLMR PDGLLQGVPF APALKRGSWR LLENMRASVE AAPVHRRLDN RHVRYLASIP FASDDPVKLG TIVLLRRRKG RAAIAAVEPA RVLSELFRGA FTPARGLGLP QFDALLSAVR GASAIELSYT RLDEAVEMLS SHHEGA
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