Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0210 |
Symbol | |
ID | 5321041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 236907 |
End bp | 237386 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789144 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001325904 |
Protein GI | 150395437 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAC CCGCCACATC GCAATCCAAG ACGCTCCGCT CGGTTCTGTT CATGTGCGGT ATGAACGCCA TCCGTTCTCC GATGGCCGAA GCGCTCGCCC GCGCGGCACT GCCAAAAGGC ACCTATGTTG CCTCAGCCGG CGTCCGCCAG GGCGAGCGGG ACCCCTTCGT GGACGTGGTT CTCGACGAGA TTGGACTGAC CATCGGCCGG CATCAGCCGC GCACCCTCGA AGAGCTCGAA GACGATTACT TCGACCTGAT TGTGACGCTC GCGCCCGAAG CCCACCATAT GGCGCTCGAA TTGACCCGCT CCATGGCGGT CGATGTGGTA TATTGGCCCA CACCCGACCC GACGGTTGCG ACCGGGACAC GGGAACAGAT CGTGTCTGCC TACCGGTCGG TGCGGGATCA CCTGGCCGCG CTGATCGCAA GCCGTCTCGC CGCCGAGGAC CACCGGAAAG GCAGTCCTCC GGCGGCATGA
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Protein sequence | MIGPATSQSK TLRSVLFMCG MNAIRSPMAE ALARAALPKG TYVASAGVRQ GERDPFVDVV LDEIGLTIGR HQPRTLEELE DDYFDLIVTL APEAHHMALE LTRSMAVDVV YWPTPDPTVA TGTREQIVSA YRSVRDHLAA LIASRLAAED HRKGSPPAA
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