| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0203 |
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| Symbol | |
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| ID | 5321033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 229663 |
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| End bp | 231639 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789136 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001325897 |
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| Protein GI | 150395430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGCTG TTTTCCGTCC GCAATCGCGG CAAAGCGAAG CCCCTGCGCG CGATCGGAGT
TCCACGCGAA AGCACCGGCG CAGCAGGCGG TTGGTGCTGT TGACGAGGGC CGCCGCTGCG
GGTGCTGCAT GTCTTCTGCT TCTTGCGGCC GTATTTGCCT GGGCTTTGCG CGACGTGCCG
TGGGACGAGA TCGCCGAGGG TTCGCTGAAG CCCGTCGTGG TGCTCGAGAC GGCCGACGGC
AAGCCGCTGG TGAGCCAGGG GCCGTTTCAG GGCTCCTATG CCGAGCGAAA AGACTTTCCG
CCCCATCTTG TCGACGCAGT TCTCGCTAGG GAGGACCGGC GTTTTTACGA GCATTCCGGG
ATCGATTTGA GGGGCATCGC CCGAGCCATC TATAGGAATA TCGGGGCCGG CGAAGTGGTG
CAGGGCGGCA GCACGATCAC GCAGCAATTG ATCAAGATCC TTTATCTCGA GCGCGACCGC
ACCTGGAAAC GAAAGATCCA GGAGGCGGTG ATCGCCTTCT GGCTGGAAAA GAAGCTCGGC
AAGGACGAGA TCCTCACCCG CTATCTGAAC AACATCTATC TCGGAGCCGG CGCAACGGGC
GTGCCTGCCG CTGCCCGCAT CTATTTCGAC AAGGACGTGC AGGAACTCGA CGTCGCCGAA
TCGGCGATGC TTGCGGCGAT CATCCGCGCA CCCTCGCAGC TGAATCCGCT CACCAATCCC
GAAGGCGCGC GCCAGCAGAC GGAACTGGTC CTCGATGCCA TGGTGAGGAA TGACCTGCTC
ACCCCGGAAC AGGCGAAGAG CGCGCGCGCC GACTTCGGCA AGTTGCAGCC TTCCAGTCCG
GCGGTCCGGT CCGGAAGCTG GTTCGCGGAC TGGATCATCC AGGATGCCCG CGAACTCGCC
GGTCCCTATA GAGGCACGAT CAAGATCAGG ACGACGATGA TACCGCGGCT GCAGGTGATC
GCCGAGAAGG TGGTTGCGGA AGCGCTCGGA CGCGAAGGCG GCAAGGTGGG CGCGTCGCAG
GCTGCCCTCG TGGCGATGAC GCCGGAGGGC GCCGTGGTCG CCATGGTGGG CGGCCGCGAC
TATAGCAAGA GCACCTTCAA CCGGGCGGTT TCCGCCATGC GTCAGCCGGG CTCCACCTTC
AAGCTGTTCG TCTATTATGC CGCCCTGAAG GCAGGCCTTA CGCCTTATGA TCCGGTCGAG
GATGCTCCCA TCGATATCAA CGGCTGGTCT CCGGAAAACT CCGGTGGCGG CTATAGAGGA
CTCGTCAGCA TGGCGGAGGC CTTTGCGCGT TCGCTCAATG CCGCGACCGT CGCCCTGGCG
ATGGAGGTCG GCATCGACAA GGTCGCCGCA GCGGCTCGAG AGCTCGGCAT CGACGCCAAT
CTTTCGGAGA CCCCAAGCCT CGCGCTTGGC TCTTCGGAGG TGAACCTGCT CGATCTCACC
GGCGCCTATG CCTCGGTTCG GGCAGGCAAG GCTCCGATCG AGCCCTGGGG CATCGAATCC
CTGCACGCTG AGGATCAGCC GCAAGCCTTC CGGGTTGGAC CGTCCACGCA AGCTTCAACG
GATGTCAGTC AGTACAGCCC TGATCTGGTC GGAATGCTCA GGCTCGTCGT CGAACGGGGC
ACGGGCCGCG AAGCCGACAT CGCAGCGCCG GCGGCAGGCA AGACCGGAAC CAGCCAGAAC
AACCGTGACG CCTGGTTCGT AGGCTTCACC GAACAATTGG TGGTCGGCGT CTGGGTGGGC
AATGACGACG AAACTCCGAT GAAGGACGTC ACCGGCGGCA AACTGCCGGC GCGGATCTGG
CGAAACTTCA TGACCGCGGC GATGGCGGAA GGCGATCCGC TGGAGCCGGG CGCCCAGGTG
ACGGGCCCCG CCCCCGCCTG CAACTTCCGC GCCTGCGCCA GGGCCTATCG TTCGTTCCGG
CCGGACGATT GCACCTTCCA GCCCTATAGC GGGCCGAGGA GGATTTGTGA GAGATAG
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| Protein sequence | MPAVFRPQSR QSEAPARDRS STRKHRRSRR LVLLTRAAAA GAACLLLLAA VFAWALRDVP
WDEIAEGSLK PVVVLETADG KPLVSQGPFQ GSYAERKDFP PHLVDAVLAR EDRRFYEHSG
IDLRGIARAI YRNIGAGEVV QGGSTITQQL IKILYLERDR TWKRKIQEAV IAFWLEKKLG
KDEILTRYLN NIYLGAGATG VPAAARIYFD KDVQELDVAE SAMLAAIIRA PSQLNPLTNP
EGARQQTELV LDAMVRNDLL TPEQAKSARA DFGKLQPSSP AVRSGSWFAD WIIQDARELA
GPYRGTIKIR TTMIPRLQVI AEKVVAEALG REGGKVGASQ AALVAMTPEG AVVAMVGGRD
YSKSTFNRAV SAMRQPGSTF KLFVYYAALK AGLTPYDPVE DAPIDINGWS PENSGGGYRG
LVSMAEAFAR SLNAATVALA MEVGIDKVAA AARELGIDAN LSETPSLALG SSEVNLLDLT
GAYASVRAGK APIEPWGIES LHAEDQPQAF RVGPSTQAST DVSQYSPDLV GMLRLVVERG
TGREADIAAP AAGKTGTSQN NRDAWFVGFT EQLVVGVWVG NDDETPMKDV TGGKLPARIW
RNFMTAAMAE GDPLEPGAQV TGPAPACNFR ACARAYRSFR PDDCTFQPYS GPRRICER
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