Gene Smed_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0191 
Symbol 
ID5321021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp210331 
End bp210792 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID640789124 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001325885 
Protein GI150395418 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA AGAAGGGGAA ATACGGATTG AAGGCGCTGG TCGATCTGGC ACGGCTCGCG 
CCCGGGGAGA CGGCCTTCAT CACGGAAATC GCGCAGCGCA ACAACATTCC GAAGAAGTTC
CTCGACACAA TTCTCCTGGA ACTGCGCAAT GCCGGCGTGC TGCGGTCGAA GAAAGGGCCG
GGCGGCGGTT ATTCCCTGTC GAGACCGGCC TCCGAGATTC GCATCGGCCA CGTCATACGG
ACGCTGGACG GCCCGCTGGC GCCGATACGC TGCGCCAGCC GCACGGCTTA TGAAATCTGC
GAAGACTGCA GCGATCCGGA AACCTGCCGT GTCCGCATCT CGATGACGTC GGTTCGCGAT
GCCATGTCGT CCATCCTCGA TTCGATGACC CTCTCTGAAT TCGCCGCAGG CGGTGTTCTC
GCTCCGGAAG CTGCAGTGGA AAAGCAGGCG CGCCGATCAT GA
 
Protein sequence
MLTKKGKYGL KALVDLARLA PGETAFITEI AQRNNIPKKF LDTILLELRN AGVLRSKKGP 
GGGYSLSRPA SEIRIGHVIR TLDGPLAPIR CASRTAYEIC EDCSDPETCR VRISMTSVRD
AMSSILDSMT LSEFAAGGVL APEAAVEKQA RRS