Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0183 |
Symbol | |
ID | 5321013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 202358 |
End bp | 203437 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789116 |
Product | ABC transporter related |
Protein accession | YP_001325877 |
Protein GI | 150395410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCAA TCGCATTGAG GCAGATCCGG AAAACCTATG GCTCGCTGCA GGTCATCCAC GACGTCGATA TCGACATTGA AAGCGGCGAG TTTCTGGTCC TCGTCGGACC CTCCGGTTGC GGCAAATCCA CGCTCCTGCG CATGATCGCC GGGCTGGAGG AGATTTCCGG CGGTATTCTC GACATCGGCG GCAAGGTGGT GAACGCGCTG CCGCCATCGG ACCGCGACAT AGCCATGGTG TTTCAAGATT ATGCGCTCTA CCCGCACATG AGCGTGCGCG AGAACATGGC GTTCGGCCTG AAGATGCGTG GCACGGATGA CGAGACGATC GAAAAACGCG TGTCGCACGC CGCAGGCATC CTCAAGATCC AGCCCTTCCT CGATCGGCGG CCGGCCCAGC TTTCCGGTGG CCAGCGCCAG CGTGTCGCCA TGGGCCGCGC CATCGTGCGC GAACCCTCGG CCTTCCTCTT TGACGAGCCC CTCTCCAACC TCGACGCGGC ACTGCGCGTC GAAATGCGCC TGGAAATCGC CAAGCTACAC AACCGCATGA AAGCCACGAC CGTTTACGTC ACCCATGACC AGGTCGAGGC GATGACACTG GCAGACCGCA TCGTGGTTCT GAATGCCGGC AAGATCGAGC AGATCGGCCC GCCGCTCGAT CTCTACCACC GACCGGCCAG CCTCTTCGTC GCGCGCTTCA TCGGGAGCCC GACGATGAAT ACCTTGCCGG CGAAGGTTGT CTCCGATGGC GGCGGCAGTG CCATACGCCT AAAAGAGCGC ACCCTGCAGC TGGTCGGCTG GTCCGGACAG CCGATCCGCG CTGGCGAGGT CACTTTCGGC ATTCGGCCGG AAGACCTGGT CGTCTGCCGG CCGGAAGATG CGTGGTTCAG CGGTGAGCTT GCCGTGGCCG AGCGGCTGGG TAGCCAGACT TACGGCTATG TTGAGATCGG CGAGGAGCGG ATGCTGACCG TCGAATTTCC GCGCAGCACG CCGATCCGCG TTGGCGAGCC GATCCATGTC CGCCCGAACA TGGAAGCAAT CCATCTGTTC GATACCGCGA CCGGCCTGCG CAAGACCTGA
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Protein sequence | MTAIALRQIR KTYGSLQVIH DVDIDIESGE FLVLVGPSGC GKSTLLRMIA GLEEISGGIL DIGGKVVNAL PPSDRDIAMV FQDYALYPHM SVRENMAFGL KMRGTDDETI EKRVSHAAGI LKIQPFLDRR PAQLSGGQRQ RVAMGRAIVR EPSAFLFDEP LSNLDAALRV EMRLEIAKLH NRMKATTVYV THDQVEAMTL ADRIVVLNAG KIEQIGPPLD LYHRPASLFV ARFIGSPTMN TLPAKVVSDG GGSAIRLKER TLQLVGWSGQ PIRAGEVTFG IRPEDLVVCR PEDAWFSGEL AVAERLGSQT YGYVEIGEER MLTVEFPRST PIRVGEPIHV RPNMEAIHLF DTATGLRKT
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