| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0173 |
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| Symbol | |
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| ID | 5321003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 191442 |
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| End bp | 192266 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789106 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001325867 |
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| Protein GI | 150395400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.545888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG AAACAACGCA CGCGCTTGCA TACACGCCTG AAGACCTCCC GAAAAAGGAG
AGCTTCCTCA AGCCGCATCG CATCCTGCTG ATCCTCCTCT TCGCGGCGCT CGTGGTGGCA
ATCGCAGTTT TCATGCGCTG GGACTGGCTG CCGCGCTACT TGCCGAGGCT CGGCTCGGGC
ATCCTCGTAA GCCTCGCAAT GCTCTTCAGC ACGGCATTTC TCGGCTTCCT GCTCGCCGTG
CCGCTTGGCC TCTTCCAGGT GACGGGCCCC TCTTTCCTCA AAGTTCCGGC CCGCATCTTC
TGCACCGTAA TTCGCGGCAC GCCGCTGCTG TTGCAGCTAT GGCTCCTCTA TTACGGCCTC
GGCTCGCTGT TTCCACAGTT CCCGGCGATC CGGCAATCCT TTCTCTGGCC ATATCTGCGC
GAGGCCTGGC CCTATGGGGT GGCAGCGCTC ACGGTCTCCT TCGCCGCCTA TGAGGGCGAG
GTCATGCGCG GCGCGTTTGC CGGCGTGCCC GCCGGAGAGC TCGAGGCGGC CCGCGCCTAC
GGCATGGGCC GATGGACCAT GTTCCGGCGC ATCTGGCTGC CGCGGGCGAT CCACCGAGCT
CTGCCCACCC TCAACGGCGA GACGGTGCTG CAGTTGAAGT CCACCCCTCT CGTCGCGACA
ATCACCGTCG TGGACGTCTA TGCGGTGATC TCGAAGGTAC GCCAAGAAAC GTACCTGACC
TATGAGCCGC TCCTGCTGCT CGCGGCCATC TATATGTGCC TGACCGGCAC TCTGGTCGTC
GCCTTCCGCT ATTTCGAAAA TCGCATCCCA ACGCGTGGTG CCTGA
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| Protein sequence | MTDETTHALA YTPEDLPKKE SFLKPHRILL ILLFAALVVA IAVFMRWDWL PRYLPRLGSG
ILVSLAMLFS TAFLGFLLAV PLGLFQVTGP SFLKVPARIF CTVIRGTPLL LQLWLLYYGL
GSLFPQFPAI RQSFLWPYLR EAWPYGVAAL TVSFAAYEGE VMRGAFAGVP AGELEAARAY
GMGRWTMFRR IWLPRAIHRA LPTLNGETVL QLKSTPLVAT ITVVDVYAVI SKVRQETYLT
YEPLLLLAAI YMCLTGTLVV AFRYFENRIP TRGA
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