Gene Smed_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0169 
Symbol 
ID5320999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp187021 
End bp187332 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content59% 
IMG OID640789102 
Productchorismate mutase-related enzyme 
Protein accessionYP_001325863 
Protein GI150395396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01803] chorismate mutase related enzymes 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.483631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA CCGCCGCAGA ATGCACCACG ATGGCCGATA TTCGTGTTGA AATCGACCGG 
ATCGACCACG CCCTCATGAC GCTCTTCGCC GAGCGTTGGG GCTATATCGA GCGGGCCGCG
GAGATCAAAC GCCCGCTGAA CCTGAAGGCG GACATTCCGG TACGGGTGAC GGAAGTGAAG
CAGAATGCGC GCCGGAATGC CATTGATCTC CGGCTGGATC CGGACTTTTA CGAGGATCTG
TGGGCGCGAC TTGTCGAAAG TGCCATCGCC CATGAGCGCA AGCTTCTCGG CGAGGACGAC
GCTGAAATTT GA
 
Protein sequence
MQKTAAECTT MADIRVEIDR IDHALMTLFA ERWGYIERAA EIKRPLNLKA DIPVRVTEVK 
QNARRNAIDL RLDPDFYEDL WARLVESAIA HERKLLGEDD AEI