Gene Smed_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0163 
Symbol 
ID5320993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp179000 
End bp179437 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640789096 
Productputative signal peptide protein 
Protein accessionYP_001325857 
Protein GI150395390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.873664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGA TAGTCGCGAT GTTCGCGCTC GGGTCGGCTT TCGGTCTGAT CGCCCCGGCC 
GCCGCCCAGG AAGCGTCGCC GGGCCGCTAC AGCATGCAGA AATCGGAGAC CGGGTTTGCC
CGACTCGACA CCGAAACCGG CGAGGTTTCT CTGTGTCGGG AAAACAACGG AGAGCTCGTC
TGCAGGATGG CCGCCGACGA GCGTGCCGCA TTCGAACGGG AGCTCGATCT TCTCAGCGAT
CGCATCGAAG CCCTGGAAAG GGCCGTGGAA AGTGGTGAAA CCGCGGCCAA ACCGCCCCTT
CCGGACGAGG AAGAGATTGA CCGCGCAATG AGCATCATGG AAAGAATGAT GCGCAGGTTC
ATGGGGATCG TGAAGGAATT CGAGGGCGAC GGCAGCGATT CCACCGACGA AGGTGAGAGC
GTACCGCAGA AGACCTGA
 
Protein sequence
MRQIVAMFAL GSAFGLIAPA AAQEASPGRY SMQKSETGFA RLDTETGEVS LCRENNGELV 
CRMAADERAA FERELDLLSD RIEALERAVE SGETAAKPPL PDEEEIDRAM SIMERMMRRF
MGIVKEFEGD GSDSTDEGES VPQKT