Gene Smed_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0162 
Symbol 
ID5320992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp178534 
End bp178881 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content64% 
IMG OID640789095 
Producthypothetical protein 
Protein accessionYP_001325856 
Protein GI150395389 
COG category[S] Function unknown 
COG ID[COG3502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.965417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.834789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTA CCATTTACAA GATCGTTCCG GTGCTCCTAT GGCAGGAGGC CCGGCGGACC 
GGCGCTTTCT TCGGCGCCCC GGTCGACCTC GCCGACGGCT TCATTCATTT TTCGACACGG
GATCAGGTCG TCGAGACGGC TGCGCGGCAC TTCGAGGGAC AGGACGGCCT GCTGCTCGTT
GCGATCGATG CAAGCGCACT GGGCGACAAA CTCATCTATG AGCCCTCCCG TGGCGGGGCG
CTGTTTCCGC ATCTCTATGC GGACCTCCCG ATGGAAGCGG TGCTGTGGGA AACACCGCTT
CCGCTACGGC CGGACGGGCA GCACGACTTC CCGGAGCTCG CGCCATGA
 
Protein sequence
MNATIYKIVP VLLWQEARRT GAFFGAPVDL ADGFIHFSTR DQVVETAARH FEGQDGLLLV 
AIDASALGDK LIYEPSRGGA LFPHLYADLP MEAVLWETPL PLRPDGQHDF PELAP