| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0153 |
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| Symbol | |
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| ID | 5320983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 169674 |
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| End bp | 172328 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789086 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001325847 |
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| Protein GI | 150395380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.178262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGGT CTTCGTGTCA ATCAATGCGA CGGCACCTAG ATGCAGCCTT CTCTTTTTCC
GCGTTTGATC TACCTTTGTT CTCCGTGGAA AGGATCGATT CCCCATTGCC GGAAAGCGGC
GCCCTGACAT TGCCCACACC CTTTCTCCGG TGGTTTTCGG AAAAGGGCTG GCGACCGCGC
GCGCATCAGC TGGAGCTTCT ATTACGCTCC GAGGCTGGCG AGAGTACGCT TCTGATCGCG
CCGACCGGGG CCGGCAAGAC GCTCGCCGGC TTTCTGCCCT CGCTCGTCGA CATCGACAGG
CGCGGCATCA TCCCCGCCGG ATCGCCCTTC GTCGGTATCC ATACGCTGTA CATATCGCCG
CTGAAGGCGC TTGCCGTCGA CATCGAACGC AACCTTATGA AGCCGGTCGG TGAGATGGGG
CTGCCGGTCC GGATAGAAAA CCGCACCGGC GACACGCCCC AAGGCAAGCG ACAGCGTCAA
AAGCTCAATC CGCCCGACAT TTTGCTGACG ACCCCGGAGC AACTGGCGCT GCTTCTCGCC
AATGGCGAGG CGGAGCGCTT CTTCAAGGAT CTGCGTTATG TGGTCCTGGA CGAGCTGCAC
TCGCTGGTGA TGTCGAAGCG CGGTCATCTC CTGTCGCTCG GCCTCGCGCG TCTGCGCCGG
CTCGCCCCCG CACTGCAGAC GATCGGCCTT TCGGCGACGG TCGCCGATCC TTTGGACCTG
CAGCGATGGC TGGTCGCGCA AACGCCCCCG CAGGAGGCCA CCCCACAGGA GACCCCCACG
CAGCAGGCGT GTGCGGGGTT GATCACCGTT GCCGGTGGAG CAAAACCCGA AATCGCCATC
CTTCGGACGG AGAAACACGT GCCCTGGGCC GGCCATTCGG CACGTTATGC GATCGCCGAC
GTCTATGTCG CCATCAAAGA GCACCGTACG ACGTTGCTCT TCGTCAACAC GCGCAGCCAG
GCGGAGATGC TGTTCCAGGA GCTCTGGACG ATCAACGACG ATAATCTGCC GATCGCCCTG
CACCACGGTT CTCTCGACGT CGCCCAGCGT CGCAGGGTGG AGGCGGCGAT GGCCGAAAAC
CGTCTGCGCG CCGTCGTCGC GACGTCGACG CTCGATCTCG GGATCGACTG GGGCGACGTC
GATCTTGTCG TCCACGTCGG GGCTCCGAAG GGTGCAAGCC GGCTTGCGCA GCGCATCGGC
CGCGCCAACC ATCGCATGGA CGAGCCGAGC CGCGCCATTC TGGTTCCGGC CAACCGCTTC
GAAGTGATGG AATGCCAGGC GGCGCTCGAC GCCAATTATA TCGGCGCTCA GGACACGCCG
CCGATCGGCA AGGGCGCGCT CGACGTATTG GCACAGCATA TTCTCGGTAT GGCCTGCGCG
CGGCCCTTCG ATGCGTTGGA ACTCTACGAT GAGGTGACCA GCGCTGCGCC CTATGCCCAT
CTTTCCTGGG AAACCTTCGA GCGGGCCGTC GACCTCGTCG CCACCGGTGG ATATGCCCTT
CGCACCTATG AGCGCTACGC CCGCATCCGC AGGACGAAGG ACGGGCTCTG GCGCGTCTCC
AACCCGACGG TCGCACAGCA ATACCGTCTG AATGTCGGAA CGATCGTCGA GTCGCCTATG
CTGAACATCC GCATGGTCAA GCGGAACCAG CGCGGATCGC TCGGCCGGGG CGGCATGTCG
CTGGGCAAGG TGGAAGAGTA TTTCCTCGAA ATGCTTTCAC CCGGCGACAC CTTTCTCTTT
TCCGGCAAGG TGCTGCGCTT CGAGGGCATC CGCGACAACG AATGCCTGGT TTCGCAGGCG
TTCTCCTTCG ACCCCAAAGT ACCGAGCTAT GCCGGCGGCA AGTTTCCGCT ATCGACCTAT
CTCGCGGCAC AGGTGAGAGA GATGCTCGCC GACCCGGATC GCCGCGACCG CCTGCCGGAC
CAGGTCAGGG ACTGGCTGGC CCTCCAGGGG GACGTCTCTA TGCTTCCGCG CGCCGACGAA
CTCCTGATCG AGACCTTCCC GCGCGGCAGC CGGCATTACA TGATCGCCTA CGCCTTCGAA
GGCAGGCTCG CCCACCAGAC GCTCGGTATG CTGCTGACGC GCCGCCTCGA CCGCGCCGGA
TTGAAACCGC TTGGCTTCGT CGCGACAGAC TATTCCCTCG CCGTGTGGGC GCTCGACGAC
ATGGGCGCGG CATTCCAGGC GGGTAGGCCG TCGCTCGGTC AGCTCTTCGA GGAGGATATG
CTGGGTGACG ATCTGGAGGC ATGGCTGAAC GAATCCTTCC TCCTGAAACG CACCTTTCGC
AACTGCGCGG TTATTGCCGG GCTCATCGAG CAGCGCCATC CCGGCAGAGA GAAGACGGCA
CGGCAGATTA CGGTTTCCGC CGACCTCATT TACGACGTAT TGCGCGCGCA CGAGCCGGAC
CACATCCTCC TCGAGGCGAC GCGCAACGAT GCGGCCACCG GGCTCCTGGA CATCGACCGC
CTGGGTTCCA TGCTCAAGCG GATCAAGGGA CACATCACCC ATCGCGGGCT CGATCGCATC
TCGCCGCTTG CCGTGCCGGT GATGCTGGAA ATCGGGCGGG AATCGGTGCA TGGGGAAGCA
CAGGATTTCC TGCTGACGGA AGCGGCCGAC GATCTGATCA ACGAGGCGAT GGGCGGCAAA
GGTACGGACT ATTGA
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| Protein sequence | MIRSSCQSMR RHLDAAFSFS AFDLPLFSVE RIDSPLPESG ALTLPTPFLR WFSEKGWRPR
AHQLELLLRS EAGESTLLIA PTGAGKTLAG FLPSLVDIDR RGIIPAGSPF VGIHTLYISP
LKALAVDIER NLMKPVGEMG LPVRIENRTG DTPQGKRQRQ KLNPPDILLT TPEQLALLLA
NGEAERFFKD LRYVVLDELH SLVMSKRGHL LSLGLARLRR LAPALQTIGL SATVADPLDL
QRWLVAQTPP QEATPQETPT QQACAGLITV AGGAKPEIAI LRTEKHVPWA GHSARYAIAD
VYVAIKEHRT TLLFVNTRSQ AEMLFQELWT INDDNLPIAL HHGSLDVAQR RRVEAAMAEN
RLRAVVATST LDLGIDWGDV DLVVHVGAPK GASRLAQRIG RANHRMDEPS RAILVPANRF
EVMECQAALD ANYIGAQDTP PIGKGALDVL AQHILGMACA RPFDALELYD EVTSAAPYAH
LSWETFERAV DLVATGGYAL RTYERYARIR RTKDGLWRVS NPTVAQQYRL NVGTIVESPM
LNIRMVKRNQ RGSLGRGGMS LGKVEEYFLE MLSPGDTFLF SGKVLRFEGI RDNECLVSQA
FSFDPKVPSY AGGKFPLSTY LAAQVREMLA DPDRRDRLPD QVRDWLALQG DVSMLPRADE
LLIETFPRGS RHYMIAYAFE GRLAHQTLGM LLTRRLDRAG LKPLGFVATD YSLAVWALDD
MGAAFQAGRP SLGQLFEEDM LGDDLEAWLN ESFLLKRTFR NCAVIAGLIE QRHPGREKTA
RQITVSADLI YDVLRAHEPD HILLEATRND AATGLLDIDR LGSMLKRIKG HITHRGLDRI
SPLAVPVMLE IGRESVHGEA QDFLLTEAAD DLINEAMGGK GTDY
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