Gene Smed_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0152 
Symbol 
ID5320982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp168839 
End bp169564 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID640789085 
Productmetallophosphoesterase 
Protein accessionYP_001325846 
Protein GI150395379 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.114454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCC TTCTACACGC GATATCGGCG CCTGCCGCCA ACGTCTCCAT TCAGACGCGC 
ACGACGATCA ATGGCGTCGC GGCGATCTGC GACCCGCTCG GCGGTCTCTA CCTGCCCGAA
GGCCGCACGC TTGTCGTATC CGACCTCCAT CTTGAAAAAG GGTCGGCCTT TGCCCGGCGC
GGCATGATGC TGCCCCCTTA CGATACGCTT GCGACGCTCA GGATACTGGA GGCGGTGGTC
GCTCGCCACA GCCCGGCAAC CGTCATCAGC CTCGGCGACA ATTTCCACGA CCGCAAAGGA
TCGGCGGCAA TGCCGGAAAA TTTCCGTCAG ATGGTCGCTG CGATGGCCCG TGGCCGCGAA
TGGATATGGA TCAACGGCAA TCACGATCCC GACGGGGCAC AGGGGTTGCC CGGCACCTCC
ATGGACGAGC TACGCCATGC CGGCCTCGTC TTCAGGCACG AACCCTCGAC AGGCGACGGC
ATCGGCGAGA TCGCCGGCCA TCTGCATCCG TCCGCTACGG TGAGGCGGCG GGAAAGGTCG
GTCCGGCGCG CCTGCTTTGC GACGGACGGC AGGCGTCTCG TCATGCCCGC CTTCGGCGTC
ACGACGGGAG GCCTCGATCT GAGGCATCCT GCGATGACCG GCCTCTTCGA CCGGCAGCAG
CTCATCGCCC ACATGCTCGG CCGAGACCGG ATCTATTCGG TGCGCTTCGC CAATCTTCTC
GGTTAG
 
Protein sequence
MHRLLHAISA PAANVSIQTR TTINGVAAIC DPLGGLYLPE GRTLVVSDLH LEKGSAFARR 
GMMLPPYDTL ATLRILEAVV ARHSPATVIS LGDNFHDRKG SAAMPENFRQ MVAAMARGRE
WIWINGNHDP DGAQGLPGTS MDELRHAGLV FRHEPSTGDG IGEIAGHLHP SATVRRRERS
VRRACFATDG RRLVMPAFGV TTGGLDLRHP AMTGLFDRQQ LIAHMLGRDR IYSVRFANLL
G