Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0152 |
Symbol | |
ID | 5320982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 168839 |
End bp | 169564 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640789085 |
Product | metallophosphoesterase |
Protein accession | YP_001325846 |
Protein GI | 150395379 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.114454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCGCC TTCTACACGC GATATCGGCG CCTGCCGCCA ACGTCTCCAT TCAGACGCGC ACGACGATCA ATGGCGTCGC GGCGATCTGC GACCCGCTCG GCGGTCTCTA CCTGCCCGAA GGCCGCACGC TTGTCGTATC CGACCTCCAT CTTGAAAAAG GGTCGGCCTT TGCCCGGCGC GGCATGATGC TGCCCCCTTA CGATACGCTT GCGACGCTCA GGATACTGGA GGCGGTGGTC GCTCGCCACA GCCCGGCAAC CGTCATCAGC CTCGGCGACA ATTTCCACGA CCGCAAAGGA TCGGCGGCAA TGCCGGAAAA TTTCCGTCAG ATGGTCGCTG CGATGGCCCG TGGCCGCGAA TGGATATGGA TCAACGGCAA TCACGATCCC GACGGGGCAC AGGGGTTGCC CGGCACCTCC ATGGACGAGC TACGCCATGC CGGCCTCGTC TTCAGGCACG AACCCTCGAC AGGCGACGGC ATCGGCGAGA TCGCCGGCCA TCTGCATCCG TCCGCTACGG TGAGGCGGCG GGAAAGGTCG GTCCGGCGCG CCTGCTTTGC GACGGACGGC AGGCGTCTCG TCATGCCCGC CTTCGGCGTC ACGACGGGAG GCCTCGATCT GAGGCATCCT GCGATGACCG GCCTCTTCGA CCGGCAGCAG CTCATCGCCC ACATGCTCGG CCGAGACCGG ATCTATTCGG TGCGCTTCGC CAATCTTCTC GGTTAG
|
Protein sequence | MHRLLHAISA PAANVSIQTR TTINGVAAIC DPLGGLYLPE GRTLVVSDLH LEKGSAFARR GMMLPPYDTL ATLRILEAVV ARHSPATVIS LGDNFHDRKG SAAMPENFRQ MVAAMARGRE WIWINGNHDP DGAQGLPGTS MDELRHAGLV FRHEPSTGDG IGEIAGHLHP SATVRRRERS VRRACFATDG RRLVMPAFGV TTGGLDLRHP AMTGLFDRQQ LIAHMLGRDR IYSVRFANLL G
|
| |