Gene Smed_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0149 
Symbol 
ID5320979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp167024 
End bp167827 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID640789082 
Producthypothetical protein 
Protein accessionYP_001325843 
Protein GI150395376 
COG category 
COG ID 
TIGRFAM ID[TIGR02186] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.167062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGC TCCTCCCCCT CTCTCTCGTT GCGCTTGTGC TGGCCGTCAC CACACCGGCG 
TTGGCGCAGG TTCTGGAGCG CAAGGTCACC GACTTCACCG AAAAGCTCGA GATCGGCATC
TCTACGGAGG AGATTGCCAT CACCTCCGAT TTTCGGGGCG CCGACCTGAC GATCTTCGGC
GCCATCGACG GCTTCGACGC AAACCTGCTG GCGCAGGGCA AATACAACAT CATCGTTGCG
CTGGAAGGGC CGAAGGACAA TGCGACGGTG CGCAAGAAGG AGCGCGTGTT CGGCATCTGG
GTCAATACCC AGTCGATGAC TTTCGAGCTC GTTCCGGAGG CCTACTCTCT GTCGAGCACC
CGCGCCATCG AGACCATCGC GCCGCGGCGC GACATCGCCA ATATGGGCAT CGGCGTCGAT
CACATGCGGC TGGTGCCGCT CGGCTTCGTC GGCGACGGCA GCTCGCTCGG GGAGTTTCGC
AACGCCTTCC GGACGATTCG CGAGACAAGC GGTGTCTACC AGCGCGATCC GGGCGGGGTG
CAGTTCATCA GTTCGAGCCT GTTCAAGGCG TCGGTACGGC TGCCCGCCAA CGTCCCGAAC
GGCATTCATA TCGTGCGTGC CTATCTCTTC CGTGACGGTG TTTTCGTCGC CGCAAAGGCT
CTGCCGCTTC GGGTCGTCAA GACGGGCCTC GAACAGGCGA TCACCCGCGC AGCGCACGAT
CAGCCGCTGA TCTACGGCCT TCTGGCCGTG ACCCTCGCCG TTGTCACCGG CTGGGGCGCC
AGCCTGCTCT TCCGCAAGGA ATAG
 
Protein sequence
MRWLLPLSLV ALVLAVTTPA LAQVLERKVT DFTEKLEIGI STEEIAITSD FRGADLTIFG 
AIDGFDANLL AQGKYNIIVA LEGPKDNATV RKKERVFGIW VNTQSMTFEL VPEAYSLSST
RAIETIAPRR DIANMGIGVD HMRLVPLGFV GDGSSLGEFR NAFRTIRETS GVYQRDPGGV
QFISSSLFKA SVRLPANVPN GIHIVRAYLF RDGVFVAAKA LPLRVVKTGL EQAITRAAHD
QPLIYGLLAV TLAVVTGWGA SLLFRKE