| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0144 |
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| Symbol | |
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| ID | 5320974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 156309 |
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| End bp | 158519 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789077 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001325838 |
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| Protein GI | 150395371 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.185631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.258925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTACA CGAACTTCAA GATCGAAACA GATGCCGACG GCATTGCACT GGTCACCTGG
GACATGCCCG ACAAGTCGAT GAACGTCATC ACCGAAGAGG TGATGACGGA ACTGGACGGG
ATCATCGACC AGACGGCCGC CGACCCTGCC GTCAAGGGCG TGGTCATCAC CTCCGGCAAA
TCCTCCTTCT CCGGCGGCGC CGACCTTTCG ATGATCAAAT CCATGTTCAG CTTCCAGGCC
GAGGAAAAGA AAAAGGATCC GGACGATGCC GCCCGGAAAC TCTTCGACCT CGTCGGCCGG
ATGACCGGGC TATTCCGCAA GCTCGAAACC TCGGGCAAGC CCTGGGTCTC GGCGATCAAC
GGCACCTGCA TGGGCGGCGC ATTCGAGATG TCGCTGGCCT GCCACGGCCG CGTCGCTTCC
AATGCGAAAT CGGTGAAGAT CGCGCTTCCC GAGGTCAAGG TCGGCATCTT CCCGGGAGCC
GGCGGCACCC AGCGCGTTCC ACGGCTGACG AATACGCAGG ACGCGCTGCA GATGATGACG
ACGGGCTCCT CGCTCACGCC GGCGCGCGCG AAAGCCATGG GGCTCGTGCA CGAGGTGGCC
GACCCGGACA AGCTGATAGA GGCTGCCAAG GCGATGATCA GAAACGGCCT GAAGCCGGTG
CAGCCCTGGG ACGAAAAGGG CTTCAAGCTG CCGGGCGGCG GCATCTGGAC ACCCGCCTCC
GCACAACTCT GGCCGGCCGC CTCCGGCATC CTGCGCCGCG AGACCTATGG CAATTATCCC
GGCGCGATCG CCATCCTGAA ATGCGTCTAT GAGGGACTGC AGGTCCCCTT CGATACGGCA
TTGAAGATCG AGCAGCGCTA CTTCACCGAG ATCCTGCAGA CGACCGAGGC CTTCTCGATG
ATCCGGTCGC TGTTCGTCTC GATGCAGGAA CTCGGCAAGG GCGCACGCCG GCCGGCCGGC
GTGCCGAAAA CCGAGCTCCG ACATGTCGGC GTCGTCGGCG CCGGCTTCAT GGGCGCCTCG
ATCGCTTATG TGACCGCCGC TGGCGGCATC CCGGTCACCC TCATCGACCG TGACATGGAA
GCGGCAGCGA AGGGCAAGGC GCATTCGGAA GGCCTGGTGA AGGATGCGGT CGGCAAGGGC
CGCCTGACGA AGGAAGAAGG CGAAGCACTG CTTTCACGCA TCACACCTTC GGCCGACTAT
GCCGATCTCA AGGATGCGGG CCTCGTCATT GAAGCCGTCT TCGAGGACCG GCAGGTCAAG
AAGGACGTGA TCGATAAGGT GGAAGCGGTG ATCGCCGACA ATGCGATCTT TGCCTCCAAC
ACCTCGACGC TGCCGATCAC CGGCCTCGCC CGGAATTCGA AACGTCCGGA GCAGTTCATC
GGCATCCATT TCTTCTCACC CGTCGAAAAG ATGATGCTGA CGGAAGTCAT CCTCGGCGAG
GAGACCGGCG ATCACGCGCT TGCCTCCGCG CTCGACTTCG TCGCGGCGAT CAGGAAGACG
CCGATCGTCG TCAACGACAC GCGCGGCTTC TACGTCAACC GCTGCGTCTT CCGCTATATC
CACGAAGCTT ACGACATGCT GATCGAGGGC GTACCGCCAG CAATGATCGA GAATGCCGCC
AAGATGGCCG GCATGCCGGT CGGGCCGCTG TCGCTCAACG ACGAGGTGGC GATCGATCTG
AGCCAGAAGA TCCTGAGAGC GGCGGTGGCC GATCTCGGCG AAAAGGCGGT CGATCCCGCG
CATATGGCAC TGATCGACAA GATGGTCGAC GAGCTCGACC GGCGCGGCCG CAAGAACGGC
AAGGGCTTCT ACGAGTATCC TGCAAAGCCG GCCAAGAAAT ATCTCTGGCC GGGACTGAAG
GAGCTCTTCC CGCAGACGAA TGCCGACGGG ATCGACGTCG ACGTGCTGAA GCAGCGCTTC
CTGGTGACGA TCGCGCTCGA GGCGGCGCGC ACGATCGAGG AAGGCATCGT CACTGATCCG
CGCGAAGCCG ATGTGGGCTC CATACTCGGT TTCGGATTTG CGCCCTACAC TGGCGGCACG
CTCTCCTATA TCGATGGCAT GGGCGCAAAA GCTTTCGTTA CGCTCTGCGA GACGCTCGCC
AGGGACTATG GCGACCACTT CCGGCCGACG GCGCTCCTGA AGGAGATGGC GGAGAAGGAG
GAAACCTTCT ACGGCCGGTT CGATCCATAT GCGGCGCCGA AGGCCGCGTA A
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| Protein sequence | MSYTNFKIET DADGIALVTW DMPDKSMNVI TEEVMTELDG IIDQTAADPA VKGVVITSGK
SSFSGGADLS MIKSMFSFQA EEKKKDPDDA ARKLFDLVGR MTGLFRKLET SGKPWVSAIN
GTCMGGAFEM SLACHGRVAS NAKSVKIALP EVKVGIFPGA GGTQRVPRLT NTQDALQMMT
TGSSLTPARA KAMGLVHEVA DPDKLIEAAK AMIRNGLKPV QPWDEKGFKL PGGGIWTPAS
AQLWPAASGI LRRETYGNYP GAIAILKCVY EGLQVPFDTA LKIEQRYFTE ILQTTEAFSM
IRSLFVSMQE LGKGARRPAG VPKTELRHVG VVGAGFMGAS IAYVTAAGGI PVTLIDRDME
AAAKGKAHSE GLVKDAVGKG RLTKEEGEAL LSRITPSADY ADLKDAGLVI EAVFEDRQVK
KDVIDKVEAV IADNAIFASN TSTLPITGLA RNSKRPEQFI GIHFFSPVEK MMLTEVILGE
ETGDHALASA LDFVAAIRKT PIVVNDTRGF YVNRCVFRYI HEAYDMLIEG VPPAMIENAA
KMAGMPVGPL SLNDEVAIDL SQKILRAAVA DLGEKAVDPA HMALIDKMVD ELDRRGRKNG
KGFYEYPAKP AKKYLWPGLK ELFPQTNADG IDVDVLKQRF LVTIALEAAR TIEEGIVTDP
READVGSILG FGFAPYTGGT LSYIDGMGAK AFVTLCETLA RDYGDHFRPT ALLKEMAEKE
ETFYGRFDPY AAPKAA
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