| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0138 |
|---|
| Symbol | |
|---|
| ID | 5320968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 151960 |
|---|
| End bp | 152805 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640789072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001325833 |
|---|
| Protein GI | 150395366 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.412267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCA AACTCTTTCC CATTGCCGGC GGCCTTGCCG CGCTCGCCGT TTACGCCGGA
ATTCTGATCG GCGGCGACGC CGCCATCCGC AACCGCGACA GCGCCGCAAC GCCCGATTTC
GTGCTTGAAA CGCCGGATGA CGCGGTCGTC GAGGTACCGG CTGCCGAAGC GCATCCTGCC
GATACTGACG CGCCTGCCCC TGCCCGGGCG CCTGCCCCGG CGCCCGACCC TCACCCTCCC
TTTGGCTCGG AAGCAAAGTC GGACAAGGGC TCTCGCATGG CTGCAAGGCC GATCGAGCCG
GGCCTCATCG CCCAGCCGGA CGACGGTGTT GCCAAACCTC TGGAAAGGAT TGCACCGAGG
CCACCGTTTT CGAAGGAGCC GGAAAAGGAA GAGCCTGCTA CCGCCGTATT CCCGCGACCG
GTCGCGCTTG CCGCCGGTCT TGTCCGATCC GGCGAGACGA CCCTGCAGCT CAAGGACATT
GAGCCGGAGA AGGCCGAGAA GGTGTGCGAA GCCAACGGCA AGAGCTGGCC GTGCGGCATG
GTCGCGCGCA CGGCGTTCCG CAATTTTCTG AGGGGGCGGG CGCTCGTCTG TGACGGGGCG
GATGGTTCCG CAGAAACCGT GAACGCCAGG TGCAGCGTCG GCGGTCGGGA CGTCGCCGAA
TGGCTGGTCA GCAATGGCTG GGCGACGCCG CTATCGGGCA CGCCGCTCGA GGCGAAGGCG
GAGGCCGCGC GAAGCGCCCG CCTCGGCTTC TTCGGGGACG ACCCCCGCGA TCTCGCCCGA
GAGCCGATCG CGCTCGACGA TCCGACCGCG ATCCTCACCC AGGAAGACGC CGCCCCGGAC
TTGTAA
|
|---|
| Protein sequence | MRSKLFPIAG GLAALAVYAG ILIGGDAAIR NRDSAATPDF VLETPDDAVV EVPAAEAHPA
DTDAPAPARA PAPAPDPHPP FGSEAKSDKG SRMAARPIEP GLIAQPDDGV AKPLERIAPR
PPFSKEPEKE EPATAVFPRP VALAAGLVRS GETTLQLKDI EPEKAEKVCE ANGKSWPCGM
VARTAFRNFL RGRALVCDGA DGSAETVNAR CSVGGRDVAE WLVSNGWATP LSGTPLEAKA
EAARSARLGF FGDDPRDLAR EPIALDDPTA ILTQEDAAPD L
|
|---|
| |