| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0136 |
|---|
| Symbol | |
|---|
| ID | 5320966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 150611 |
|---|
| End bp | 151423 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640789070 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001325831 |
|---|
| Protein GI | 150395364 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.45703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.319961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTATT TCGGCTTCTC AGAACCGGTG TGGCGTCTCG GCGCCTTTGC CGCCGCCTTC
GCCGCTCTGG CCGCACTCGA ACTCCTTCAT CCCCGGCTCG AACGGCCGGA GCTGACGCGG
ACTTTGAAAG CGCGCCGCTG GATCACCAAT CTGTCTATTC TTGTCCTCTC CTCCCTCCTG
CTGCGTGTCG CCTTTCCGAC GGCCGCCACC GGCGTTGCGA TCTGGGCCCA GGCATACGGC
TATGGGCTGC TCCCGGCGCT CGGCCTGGCG CCATCGGTTG CCGGTCTGAT CGCCTTCGTC
GCGCTCGACT TCGCGATCTG GCTCGAACAT GTCGTGTTCC ACAAGGTACC CATCCTGTGG
CGCATCCACC GTGTCCACCA TGCCGATCCG GGCGTCGACG TCACAACGGC ACTTCGCTTT
CATCCGGTTG AAATCCTCCT GTCCATGGTC TGGAAGAGCG CCGTGATCGT TCTCCTGGGC
GCGCCCGCGC TGGCCGTGCT GCTGTTCGAA ATCGTGCTCA ATGCCGGGGC GATGTTCAAC
CACGCCAATC TGCGGCTACC GAAGGCGGCA GATCAGCTTT TGCGCCGATT CATCGTCACG
CCCGACATGC ACCGCATCCA CCATTCGGTC GAGAAGGGCG AAACGGATTC AAACTACGGC
TTCAATCTCT CCGTTTGGGA TCGGATGTTC TCGACCTATA TAGCCCACCC GTCGCGAGGC
GACGACGCAA TCGAAACGGG CTTGAAAGTC TACGGGCGCA GCGAGCCCAT GAAGCTTCTG
TGGTCGCTCG TGCTGCCGTT TCGGCGGCGA TAG
|
|---|
| Protein sequence | MLYFGFSEPV WRLGAFAAAF AALAALELLH PRLERPELTR TLKARRWITN LSILVLSSLL
LRVAFPTAAT GVAIWAQAYG YGLLPALGLA PSVAGLIAFV ALDFAIWLEH VVFHKVPILW
RIHRVHHADP GVDVTTALRF HPVEILLSMV WKSAVIVLLG APALAVLLFE IVLNAGAMFN
HANLRLPKAA DQLLRRFIVT PDMHRIHHSV EKGETDSNYG FNLSVWDRMF STYIAHPSRG
DDAIETGLKV YGRSEPMKLL WSLVLPFRRR
|
|---|
| |