Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0116 |
Symbol | |
ID | 5320945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 129033 |
End bp | 130190 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640789049 |
Product | hypothetical protein |
Protein accession | YP_001325811 |
Protein GI | 150395344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.488565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGAC TTGAGACAGC GATCAGAAAT GCGCTGGAAA GATCGGATCG AAGCAGTGCG GAGGTCCGGG CGCGCATCTA TCAGTCGGCG CGTCAGGCGC TTGAGAACGG CCTGCAAAAG CAGCAGATCG AAGACCCGGA GGTCATCTCG GTGCAGCGCC ACCGGCTGGA AGCGGTCATT CGGGCGATCG AGATGGAAGA GCGCGCTGCC TTGAAGGAGC GCGCACAGAC GCCGGTGGTC AATCTCGACG AGGTGACGGC GAGGGGACAT GCGGTCGAGC GCGGCCCCGA AGCGCCAACC CGAAGGCCCG AGTTGGAAAC GAAGCCGGAG GAACGTAGTC CCGCGCAAAC GGACGGGGGG CTTGGGGCCT TGCGTCCCGA ACGCGACGGT CCGCTGGCTG CGACGAGAGC GGAGGGGAGC GACGGTCGAT CGGAAGCCAC CGGAAGCACC GTCCCGCCCG CACCCGATCC AGGCCCTGCC GACCGGCGGC CGCGCAAGCA CAGGCGCAGG CGCAGCCGTT TCTTCTCCTA TGCGATGATC GTCGCGACGC TTGCTGCAGC GGCCGGGGTC GCCGTCTGGT GGATCCAGAC GAACGATCTG CTGCGGTCGC CGACGGACAC CGGCGTTGCC AATCCGCCCG CGACGGTGGA TGCAGAGGAT TTCGACGGCG CGGCCGGCTT GCAGACCCTG GGTGCCCAGG AAGGCTTTTC CGGTGATTGG GTAGAGGTCT TTGCTCCCGG TGAGGCTGCA GCGGTCAAGC CGGGCCCGCG GGCGAGTGCG GAACCCTTCG ACGGCGACGC CGGCGAGCGC CTGCGTTTGA TCTCGCAAGC GGCATCGAAG GATGGCGACG TGGAAATCGA GATACCCGCC GATGTTCTTG CCCAGCTTTC GGGCAAATCG TCGACATTCG CCCTGACGGT GCAGGCTGCC CCGGGCAAAG CGACCGAATT CTCCGTCGAA TGCGATTTAG GGGCGCTCGG CGGCTGCGGC CGTCATCGTT TCACCGTACA CGACGAGCGG ATCGATATGT TGTTCAAGAT CAATTTCGAT CGCGGTGCCG CACCGAGCGG CCCTGGAAAA CTGGTGATCA ACAGCGACGT CGGCGGCGGC GGCAACAGCC TCGATCTCTT CGCGATCCGC GTGCAGCCGG GCGGCTGA
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Protein sequence | MSGLETAIRN ALERSDRSSA EVRARIYQSA RQALENGLQK QQIEDPEVIS VQRHRLEAVI RAIEMEERAA LKERAQTPVV NLDEVTARGH AVERGPEAPT RRPELETKPE ERSPAQTDGG LGALRPERDG PLAATRAEGS DGRSEATGST VPPAPDPGPA DRRPRKHRRR RSRFFSYAMI VATLAAAAGV AVWWIQTNDL LRSPTDTGVA NPPATVDAED FDGAAGLQTL GAQEGFSGDW VEVFAPGEAA AVKPGPRASA EPFDGDAGER LRLISQAASK DGDVEIEIPA DVLAQLSGKS STFALTVQAA PGKATEFSVE CDLGALGGCG RHRFTVHDER IDMLFKINFD RGAAPSGPGK LVINSDVGGG GNSLDLFAIR VQPGG
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