Gene Smed_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0113 
Symbol 
ID5320941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand+ 
Start bp125931 
End bp126542 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID640789045 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001325808 
Protein GI150395341 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.467953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC TCGCGCTGAT CGGTCTCACG CGGTTCATCG TCGGCGGGCA GGCGCGTTGG 
ACGGGCTCGT TGCCAGAGAT GCGCCAGCGG ATCTATTTCG CCAATCACTC CAGCCATCTC 
GATACCCTTC TGATCTGGTC GGCGTTGCCG CGCGGGCTGC GTGCGTCGAC GCATCCGATT 
GCCGCAGCGG ACTATTGGGG GAAGGGGATC GTCAGGCGTC ATATAGGTGT CAAGGTGCTG 
AACGGCGTCC TCATCGAGCG CTCGACACAG GGGCCGCCTG GAGCGGCGCT CGCTCCGTTG 
CGTAACGTGC TCTCCGAGGG CGAGTCGCTC ATCCTGTTCC CCGAAGGCTC GCGTGGCAGC 
GAGCGGCTGC CGGGGCCTTT CAAGAGCGGG CTTTACTGGC TGTCGCAAGA ATTCCCCGAT 
GTGCAACTAG TCCCGACCTA TCTGGACAAT CCTTCGCGCG CTTTTCCGAA GGGCACGTTT 
TTGCCTGTCC CCATCAGTTG CACCGTGCGT TTCGGCCCTC CGCTTGTGCG TCACGCCGGT 
GAAGAGAAGG ACGCATTCCT CGAACGCGCC CGCGCAGCGG TGTCTGCACT CGCGCCGGAC 
TCCCTCGGAT GA
 
Protein sequence
MIDLALIGLT RFIVGGQARW TGSLPEMRQR IYFANHSSHL DTLLIWSALP RGLRASTHPI 
AAADYWGKGI VRRHIGVKVL NGVLIERSTQ GPPGAALAPL RNVLSEGESL ILFPEGSRGS 
ERLPGPFKSG LYWLSQEFPD VQLVPTYLDN PSRAFPKGTF LPVPISCTVR FGPPLVRHAG 
EEKDAFLERA RAAVSALAPD SLG