| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0109 |
|---|
| Symbol | pgi |
|---|
| ID | 5320937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 119959 |
|---|
| End bp | 121584 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640789041 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001325804 |
|---|
| Protein GI | 150395337 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.444012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC TTGTCGAAAA TCTGAAAGCC ACTGCACGCG AGACCGATGC GACCGATATC
CGTGCCGCCT TCGCGGCCGA TCCGAACCGC TTCTCGCGCT TCAGCACGGC GCTCGACGAT
CTCCTCTTCG ACTATTCCAA ATGCGCGGTG AACGACAGGA TCATCGACGG TCTCGAAGCG
CTCGCCAAGG CGGCGAAGGT CGAGGAAAAG CGGGATGCCA TGTTCCGCGG CGATATCATC
AACATCACCG AGGAGCGCGC GGTTCTGCAT ACGGCGCTCC GGAACAGGTC GAACCGGCCT
GTCCTCGTGG ACGGGAAGAA CGTCGTGCCG GACGTCAATG CCGTGCTTGA GGCTATGGGC
AGGTTCGCTG ACCACGTCCG CTCCGGAGAC TTGAAGGGCG CCACCGGCAA GAAGATCACC
GATGTCGTCA ATATCGGCAT CGGCGGCTCC GACCTCGGTC CGGTCATGGC CACGCTGGCG
CTCGCCCCAT TCCACGACGG GCCGCGGCTG CACTTCGTTT CCAACGTCGA CGGCGCCCAT
ATCGCCGACA CGCTGAAACT CCTCGATGCC GAAACCTCTC TCTTCATCGT CGCCTCCAAA
ACCTTCACCA CGATCGAGAC GATGACCAAT GCGGCGACCG CCCGTGCCTT CATTGCCGGC
AAGCTCGGCG AGGCGGCGGT CGGCCATCAT TTTGCGGCCG TCTCCACTGC CCTCGACAAG
GTCGGTGCCT TCGGCATCAA TGCCGCCCGC GTCTTCGGCT TCTGGGATTG GGTCGGCGGA
CGTTATTCCA TCTGGTCGGC GATCGGGCTG CCGCTGATGA TCGCAATCGG CAAAGAGAAC
TTCGGCCGCT TCCTCGACGG TGGCCATTCG ATGGATGAGC ATTTCCGCGC AGCGCCGCTT
CGCCAGAACA TACCCGTGCT GCTCGGGCTC ATCGGTTTCT ATAATCGAAA TGTTCTCGGC
TATCCGTCGC GGGCGATCCT GCCCTACGAT CAGCGGCTGA CGCGCTTTCC GGCCTATCTG
CAGCAACTCG ACATGGAATC GAACGGCAAG GGCGTGACGC TCGAGAGCCA GCCAGTCGAA
TTCTCGACGG GTCCCGTCGT CTGGGGCGAA CCCGGCACCA ACGGTCAGCA TGCCTTTTAT
CAGCTGATTC ATCAGGGAAC CGACATTATC CCCGCCGAAT TCATGATTGC AGCGAAGGGC
CACGAGAAGG ACCTTCGCCA TCAGCACCAG CTCCTGATCG CAAACTGCCT GGCGCAATCG
GAAGCGCTGA TGAAAGGGCG CACTCTGGCG GAAGCCAAGG CGCAGCTGAC ATCGAAGGGC
ATGGACGAAG CGAAGGCCGA CAAAATCGCG CCGCATCGCG TCTTCACCGG CAACCGGCCG
TCGCTGACCA TCGTATATGA TCAGCTTGAT CCCTTCGCGC TCGGTCGCCT GATAGCTCTT
TACGAGCATC GCGTATTTGT CGAAGGCGCC CTCTTCAACA TCAATTCCTT CGACCAGTGG
GGCGTCGAGC TCGGCAAGGA ACTGGCGACC GGCCTGCTGC CCGTCGTTGA AGGCAGGGAA
AGCGCCGAGG GCCACGATTC CTCGACTACC GGCCTCGTTG CCGCGCTCTT GAAAGCGGCC
CGCTGA
|
|---|
| Protein sequence | MKALVENLKA TARETDATDI RAAFAADPNR FSRFSTALDD LLFDYSKCAV NDRIIDGLEA
LAKAAKVEEK RDAMFRGDII NITEERAVLH TALRNRSNRP VLVDGKNVVP DVNAVLEAMG
RFADHVRSGD LKGATGKKIT DVVNIGIGGS DLGPVMATLA LAPFHDGPRL HFVSNVDGAH
IADTLKLLDA ETSLFIVASK TFTTIETMTN AATARAFIAG KLGEAAVGHH FAAVSTALDK
VGAFGINAAR VFGFWDWVGG RYSIWSAIGL PLMIAIGKEN FGRFLDGGHS MDEHFRAAPL
RQNIPVLLGL IGFYNRNVLG YPSRAILPYD QRLTRFPAYL QQLDMESNGK GVTLESQPVE
FSTGPVVWGE PGTNGQHAFY QLIHQGTDII PAEFMIAAKG HEKDLRHQHQ LLIANCLAQS
EALMKGRTLA EAKAQLTSKG MDEAKADKIA PHRVFTGNRP SLTIVYDQLD PFALGRLIAL
YEHRVFVEGA LFNINSFDQW GVELGKELAT GLLPVVEGRE SAEGHDSSTT GLVAALLKAA
R
|
|---|
| |