Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0094 |
Symbol | |
ID | 5320922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 105400 |
End bp | 106206 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789026 |
Product | metallophosphoesterase |
Protein accession | YP_001325789 |
Protein GI | 150395322 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.532674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC TTATCATTTT CTCCGACCTG CACATGGTTC CCGAAGGCGG GACCATCATC GGACTCGACC CCCACCGGCG GCTTGCCAAC GGCATTGCCC ATGTCAATCG CTTTCATGCG GATGCGGACC TGGTAATTTT TGCCGGCGAT CTCGCGCATG CGGCGGATCG CGAATCCTAT GAGCGGCTGC AGGCGCTTCT CCGCGAGTTG ATGCCTCCGG CAGCACTCAT GATCGGCAAT CACGACAGGC GCGAGCTGTT TCTGGACGTC TTCGCCGAAG CGGTGACGGA CGCCAACGGC TTCGTCCAGC AGGCGATCGA TTTCCCCGAT TGCCGCGCCA TTCTCCTCGA CACCTTGTTT GCGCCGCCCT ACGACTATCC CGTGAGCCAT GCCGGCCATC TCTGCCAAAC GCGACTCGCC TGGCTCGACC GGCAGCTCGG CGAGGCCGGC GACCGGCCGG CGCTCATCTT TATGCACCAC CCGCCGCATG CCAGCGGATT TGCCGGCATG GATATGATCC GCCTCGTCAA TGAAGACGAA TTCTATGCCC TGGTGAAGCG GCATGGCAAT GTTCGCCATA TCTTCGCCGG CCACGTTCAC CGCACCATCA GCGGCTCAAG TCGAGGCATC CCCTTCTCGA TTTTCAAAAG CCCGGTACAT CAGCAGCCGA TGCCCTTCGC CACGGCGGAT GCGTCCCTTT CGGTTGACGA ACCGGCAGCC TACGGGATCG CGCTGGTGAC CCCGGACGGC GTGCTCGTAC ACACGGAAGA CTACGAGATA GCGCGGCGCG ACGCGATGGG CACGTGA
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Protein sequence | MTKLIIFSDL HMVPEGGTII GLDPHRRLAN GIAHVNRFHA DADLVIFAGD LAHAADRESY ERLQALLREL MPPAALMIGN HDRRELFLDV FAEAVTDANG FVQQAIDFPD CRAILLDTLF APPYDYPVSH AGHLCQTRLA WLDRQLGEAG DRPALIFMHH PPHASGFAGM DMIRLVNEDE FYALVKRHGN VRHIFAGHVH RTISGSSRGI PFSIFKSPVH QQPMPFATAD ASLSVDEPAA YGIALVTPDG VLVHTEDYEI ARRDAMGT
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