Gene Smed_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0094 
Symbol 
ID5320922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp105400 
End bp106206 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID640789026 
Productmetallophosphoesterase 
Protein accessionYP_001325789 
Protein GI150395322 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.532674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC TTATCATTTT CTCCGACCTG CACATGGTTC CCGAAGGCGG GACCATCATC 
GGACTCGACC CCCACCGGCG GCTTGCCAAC GGCATTGCCC ATGTCAATCG CTTTCATGCG
GATGCGGACC TGGTAATTTT TGCCGGCGAT CTCGCGCATG CGGCGGATCG CGAATCCTAT
GAGCGGCTGC AGGCGCTTCT CCGCGAGTTG ATGCCTCCGG CAGCACTCAT GATCGGCAAT
CACGACAGGC GCGAGCTGTT TCTGGACGTC TTCGCCGAAG CGGTGACGGA CGCCAACGGC
TTCGTCCAGC AGGCGATCGA TTTCCCCGAT TGCCGCGCCA TTCTCCTCGA CACCTTGTTT
GCGCCGCCCT ACGACTATCC CGTGAGCCAT GCCGGCCATC TCTGCCAAAC GCGACTCGCC
TGGCTCGACC GGCAGCTCGG CGAGGCCGGC GACCGGCCGG CGCTCATCTT TATGCACCAC
CCGCCGCATG CCAGCGGATT TGCCGGCATG GATATGATCC GCCTCGTCAA TGAAGACGAA
TTCTATGCCC TGGTGAAGCG GCATGGCAAT GTTCGCCATA TCTTCGCCGG CCACGTTCAC
CGCACCATCA GCGGCTCAAG TCGAGGCATC CCCTTCTCGA TTTTCAAAAG CCCGGTACAT
CAGCAGCCGA TGCCCTTCGC CACGGCGGAT GCGTCCCTTT CGGTTGACGA ACCGGCAGCC
TACGGGATCG CGCTGGTGAC CCCGGACGGC GTGCTCGTAC ACACGGAAGA CTACGAGATA
GCGCGGCGCG ACGCGATGGG CACGTGA
 
Protein sequence
MTKLIIFSDL HMVPEGGTII GLDPHRRLAN GIAHVNRFHA DADLVIFAGD LAHAADRESY 
ERLQALLREL MPPAALMIGN HDRRELFLDV FAEAVTDANG FVQQAIDFPD CRAILLDTLF
APPYDYPVSH AGHLCQTRLA WLDRQLGEAG DRPALIFMHH PPHASGFAGM DMIRLVNEDE
FYALVKRHGN VRHIFAGHVH RTISGSSRGI PFSIFKSPVH QQPMPFATAD ASLSVDEPAA
YGIALVTPDG VLVHTEDYEI ARRDAMGT