Gene Smed_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0090 
Symbol 
ID5320918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp99866 
End bp100297 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID640789022 
Producthypothetical protein 
Protein accessionYP_001325785 
Protein GI150395318 
COG category[S] Function unknown 
COG ID[COG5579] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG CGGCTTTCGA TCTCGAACGC TTTACCGCGG CGCAGGAAGG CAGTTATCCG 
GCCGCACTGG CGGAGCTTCG CGCCGGAGCC AAGCATACGC ACTGGATGTG GTTCATCTTT
CCGCAAATCG CCGGCCTCGG TCGCTCGCCG ACGGCGATAT ATTATGCCCT GCCGGGTCTT
CCCGAGGCGC GGGCCTATTT CGGGCACCCT CTCCTCGGCC GTCGCATCCT CGAATGCACC
GAAGCGGTAA ACGGCGTCAG AGGGCGTAGC GCTCTGGAGA TTTTCGGCCG GCCGGACGAC
TTCAAATTCC GATCGTCGAT GACGCTCTTC GAAGCCGCAG CGCCTGAGGC CGATGCATTC
GCCCGCGCGC TGGACTTCTA CTTCAACGGC GTTCGGGACC CGAAGACACT CGAAATTCTC
GGCCGAAGCT GA
 
Protein sequence
MAGAAFDLER FTAAQEGSYP AALAELRAGA KHTHWMWFIF PQIAGLGRSP TAIYYALPGL 
PEARAYFGHP LLGRRILECT EAVNGVRGRS ALEIFGRPDD FKFRSSMTLF EAAAPEADAF
ARALDFYFNG VRDPKTLEIL GRS