| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0089 |
|---|
| Symbol | |
|---|
| ID | 5320917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 99072 |
|---|
| End bp | 99542 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640789021 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_001325784 |
|---|
| Protein GI | 150395317 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAG CCAGGAAACT TCAGGACTAT ATCGACAGCG AGGGCATCGA CTACGACACG
CTCGCTCATC ACCGCACCGC GACCACCAGT CAGACTGCCG AAGCGGCCCA TGTACCGGGC
AACAGACTCG CCAAATCCGT GGTCGTTCAC CACGAGACGG GCTATGTGCT TGCCGTCGTG
CCGGCCTCGC ACCGGGTCGA GCTGTCCACG CTGCAGGAGG TCATGAACCG CCGGCTGGGC
CTCGCCTCCG AGGAAGAGGT CAGCGAGCTG TTCAGCGATT GCGAGACGGG CGCCGTTCCG
CCCATCGGAT CGGCCTACGG CGTTGCCGTT ATTCTCGATG AAAGCCTAGA CCGGGCGAGC
GACGTCTATT TCGAAGGAGG CGACCACAGG ACGCTCGTGC ATATGAGTGG CCCGAATTTC
CGCAACCTGA CCAAGGACGC GCAGGTAGCC CGGTTCAGCC ATCCGTCGTG A
|
|---|
| Protein sequence | MTIARKLQDY IDSEGIDYDT LAHHRTATTS QTAEAAHVPG NRLAKSVVVH HETGYVLAVV
PASHRVELST LQEVMNRRLG LASEEEVSEL FSDCETGAVP PIGSAYGVAV ILDESLDRAS
DVYFEGGDHR TLVHMSGPNF RNLTKDAQVA RFSHPS
|
|---|
| |