Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0087 |
Symbol | |
ID | 5320915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 97770 |
End bp | 98345 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789019 |
Product | invasion associated locus B family protein |
Protein accession | YP_001325782 |
Protein GI | 150395315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGGC AACTCGCCAC CGTGCTTCCC GTCGCGGCTT GCATGGTCCT GTCCGGCGGC GCTCCCGCCG TCGGGCAGGG TGCGACGCCG GAACCCCGCT ACTGGATCAA GCCGTCCGAG GTCGCGATTC CGCCCGACGT GCCGATCGGC ATGTATCGCC GCCTCATCCG TCCTTTCGAG AACTGGACTC TGATTTGTGA CGAGAATCTC AAGTCCAAAC AGAGAATCTG CAACGTGTCT CAACTCGTCG TCGATAAGGC CGGCAACACT GTTTTCAGCT GGTCGCTGGC CGCAACCGCA CAAGGCAAGC CGGTGATGAT CCTGCGCGTC CCCCCCGCGG CGGGAAAAGG TTCGATCATC CGTCTGTCTT TCTCCGACCG AAAGGAGCCG GTCGAGGTGC GGGTGGAGAG CTGTGACTCC GTTGTATGCC TGGGAACGGT ACCGGTAGGC CCGATCCTTC GCTCCCATAT CGCTCGGCAG TCGACGGTCC GCCTGTCCTA TGGCGCCGAT CAGGGGGACG TCAGTTTCAA TCTGCCCTTC CAAGGGCTGC CTCAGGCATT GGAGGCGATA GAGTAG
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Protein sequence | MSRQLATVLP VAACMVLSGG APAVGQGATP EPRYWIKPSE VAIPPDVPIG MYRRLIRPFE NWTLICDENL KSKQRICNVS QLVVDKAGNT VFSWSLAATA QGKPVMILRV PPAAGKGSII RLSFSDRKEP VEVRVESCDS VVCLGTVPVG PILRSHIARQ STVRLSYGAD QGDVSFNLPF QGLPQALEAI E
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