Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0077 |
Symbol | |
ID | 5320904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 85094 |
End bp | 85633 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789008 |
Product | hypothetical protein |
Protein accession | YP_001325772 |
Protein GI | 150395305 |
COG category | [S] Function unknown |
COG ID | [COG4803] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT TGATTGTAGT GGGATTCGAT TCGACGGATG AGGCCGACAA GGTCCTCTTG AAGCTCAACA GCCTGCGGAA GGAATATCTG ATCGACCTCG AAGATGCGGT GGTCGTCGTG CGCGACGCAG AAGGAAAGGT GCACCTGAAG CAGAGCCTGA ACCTCACCGC CGTCGGCGCC ACTTCCGGTC TTCTGTCCGG CTCGCTCTGG GGCGGGCTCG TCGGATTGCT CTTCCTCAAT CCGATCGCCG GTTTTGCCAT CGGCGGCGCT CTCGGAGCAG GTGCCGGCGC GCTTTCCGGG TCGCTTGCCG ACTACGGCAT AGACGACGAA TTCATCAAGT CGCTCGGCAA CACCATCCCG AACGGTTCTT CGGCGCTCTT CGTTCTGGTG CGCAAGGTGC AGCCCGAAAA GGTGCTCGCC GAGTTTTCGG GCCTTCGCGG CCGCGTGCTG AAGACGTCGC TCTCTCCGGA ACAGGAGCAG AGGCTTCAGG CAGCGCTCTC ACAAGCGCAG ACACCATCGC CGCAGGCGGG GACGTTCTGA
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Protein sequence | MSDLIVVGFD STDEADKVLL KLNSLRKEYL IDLEDAVVVV RDAEGKVHLK QSLNLTAVGA TSGLLSGSLW GGLVGLLFLN PIAGFAIGGA LGAGAGALSG SLADYGIDDE FIKSLGNTIP NGSSALFVLV RKVQPEKVLA EFSGLRGRVL KTSLSPEQEQ RLQAALSQAQ TPSPQAGTF
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