Gene Smed_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0076 
Symbol 
ID5320903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp84285 
End bp84995 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID640789007 
Producthypothetical protein 
Protein accessionYP_001325771 
Protein GI150395304 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.499992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC AGAAGCCCGA AAGCGGGGAT TCCCGCCGCG ACGAGGTGAT CGCGGGGGAG 
TACGTGCTCG GCGTCCTGTC GGCCGAGGAT CGCCGCAAGG CCGAAGCGCG CATGGCAACG
GACCGCAATT TCGCGGCCAT GGTCGCTCGA TGGCAAAACA ATCTTGCTGC CTTCGGCGAC
CCCTATGAAA CGGTCGCGCC ACGGCGCCGA TACGGTGGCT CAGTCGGGCG CGGAGCCTTC
GAAGAACGCC GAGGGGCGCA CGACCAACGC GGTGTCTGGG GCTCGCTTGC TCTCTGGCGC
AGCCTCGCCC TCGCATCGCT TTCGGCAATC GTCGTAATGG CCGGCGCGAT GGCCGGACTT
TTCAGCAGCC GCCCAGGCGG CACTCCGCTT GTGGCAAACC TCGAATCGTC TGGCGGCCCG
GTCAACCTGG TCCTGCACTT CGAACCGGAT ACGGGACGCC TGTGGCTGTC GCCGACCGCC
GCGGTAAGAG ACAGATCGCT CGAACTCTGG CTGACCAAGG GCGACGATGC ACCCGTCTCG
CTCGGCGTGC TGCTGCCCCC GAGTGAAGGC GCAACCGTGC TCGAGCCGCG ATTGCGTGGC
CGAATAGCCC CGGGGTCCAG GCTTTTCGTA AGCGTCGAAC CACGGGGAGG ATCGCCGAAA
GGCGCGCCTA CCGGAGCGGT CATCGCGCAA GGCATGGCGC GCGTCTTCTG A
 
Protein sequence
MTTQKPESGD SRRDEVIAGE YVLGVLSAED RRKAEARMAT DRNFAAMVAR WQNNLAAFGD 
PYETVAPRRR YGGSVGRGAF EERRGAHDQR GVWGSLALWR SLALASLSAI VVMAGAMAGL
FSSRPGGTPL VANLESSGGP VNLVLHFEPD TGRLWLSPTA AVRDRSLELW LTKGDDAPVS
LGVLLPPSEG ATVLEPRLRG RIAPGSRLFV SVEPRGGSPK GAPTGAVIAQ GMARVF