Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0076 |
Symbol | |
ID | 5320903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 84285 |
End bp | 84995 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640789007 |
Product | hypothetical protein |
Protein accession | YP_001325771 |
Protein GI | 150395304 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.499992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGC AGAAGCCCGA AAGCGGGGAT TCCCGCCGCG ACGAGGTGAT CGCGGGGGAG TACGTGCTCG GCGTCCTGTC GGCCGAGGAT CGCCGCAAGG CCGAAGCGCG CATGGCAACG GACCGCAATT TCGCGGCCAT GGTCGCTCGA TGGCAAAACA ATCTTGCTGC CTTCGGCGAC CCCTATGAAA CGGTCGCGCC ACGGCGCCGA TACGGTGGCT CAGTCGGGCG CGGAGCCTTC GAAGAACGCC GAGGGGCGCA CGACCAACGC GGTGTCTGGG GCTCGCTTGC TCTCTGGCGC AGCCTCGCCC TCGCATCGCT TTCGGCAATC GTCGTAATGG CCGGCGCGAT GGCCGGACTT TTCAGCAGCC GCCCAGGCGG CACTCCGCTT GTGGCAAACC TCGAATCGTC TGGCGGCCCG GTCAACCTGG TCCTGCACTT CGAACCGGAT ACGGGACGCC TGTGGCTGTC GCCGACCGCC GCGGTAAGAG ACAGATCGCT CGAACTCTGG CTGACCAAGG GCGACGATGC ACCCGTCTCG CTCGGCGTGC TGCTGCCCCC GAGTGAAGGC GCAACCGTGC TCGAGCCGCG ATTGCGTGGC CGAATAGCCC CGGGGTCCAG GCTTTTCGTA AGCGTCGAAC CACGGGGAGG ATCGCCGAAA GGCGCGCCTA CCGGAGCGGT CATCGCGCAA GGCATGGCGC GCGTCTTCTG A
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Protein sequence | MTTQKPESGD SRRDEVIAGE YVLGVLSAED RRKAEARMAT DRNFAAMVAR WQNNLAAFGD PYETVAPRRR YGGSVGRGAF EERRGAHDQR GVWGSLALWR SLALASLSAI VVMAGAMAGL FSSRPGGTPL VANLESSGGP VNLVLHFEPD TGRLWLSPTA AVRDRSLELW LTKGDDAPVS LGVLLPPSEG ATVLEPRLRG RIAPGSRLFV SVEPRGGSPK GAPTGAVIAQ GMARVF
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