Gene Smed_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0075 
Symbol 
ID5320902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp83044 
End bp83931 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID640789006 
Productacetylglutamate kinase 
Protein accessionYP_001325770 
Protein GI150395303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CAGAAAGTGA AATCCAGGCC CGTCTGCTCG CCCAGGCACT GCCTTATATG 
CAGCGCTACG AGAACAAGAC GATCGTCGTC AAATATGGCG GCCACGCCAT GGGAAATGCC
GAGCTCGGGC GCGCTTTTGC AAGCGATGTC GCGCTTCTGA AACAGTCCGG CGTCAATCCG
ATCGTCGTGC ATGGAGGCGG CCCTCAGATC GGCGCCATGC TCAACAAGAT GGGCATCGAA
TCAAAGTTCG AAGGCGGGCT CCGCGTCACT GACGAGAAGA CGGTCGAGAT CGTGGAGATG
GTGCTTGCCG GATCGATCAA CAAGGAGATC GTCGCGCTGA TCAATCAGAC CGGCGAATGG
GCGATCGGCC TTTGCGGCAA GGACGGCAAC ATGGTCTTTG CGGAAAAGGC GAAGAAGACG
ATCCGCGACC CGGATTCCAA TATCGAGCGC GTACTCGACC TCGGCTTCGT CGGAGATGTG
GTCGAGGTGG ACCGCACGCT TCTCGATCTG CTTGCCCGCT CCGAGATGAT ACCCGTGATC
GCTCCGGTCG CGCCGGGCCG GGACGGCCAC ACCTACAACA TCAACGCCGA CACCTTTGCC
GGCGCGATCG CCGGCGCACT CAACGCGACG CGCCTCCTCT TCCTGACCGA TGTCCCCGGC
GTCCTGAACA AGAAGGGCGA GCTCATCAAG CAGCTCTCTG TCGCAGAGGC ACGGGCGCTG
ATTGCCGACG GTACCATATC GGGCGGCATG ATCCCGAAGG TGGAGACCTG CATCGAGGCC
ATCGGGGCCG GCGTGCAGGG CGTCGTCATC CTCAACGGCA AGACGGCACA TGCAGTACTG
CTCGAAATTT TCACCGAGCA CGGTGCGGGC ACACTCATCG TGCCGTGA
 
Protein sequence
MSASESEIQA RLLAQALPYM QRYENKTIVV KYGGHAMGNA ELGRAFASDV ALLKQSGVNP 
IVVHGGGPQI GAMLNKMGIE SKFEGGLRVT DEKTVEIVEM VLAGSINKEI VALINQTGEW
AIGLCGKDGN MVFAEKAKKT IRDPDSNIER VLDLGFVGDV VEVDRTLLDL LARSEMIPVI
APVAPGRDGH TYNINADTFA GAIAGALNAT RLLFLTDVPG VLNKKGELIK QLSVAEARAL
IADGTISGGM IPKVETCIEA IGAGVQGVVI LNGKTAHAVL LEIFTEHGAG TLIVP