Gene Smed_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0074 
Symbol 
ID5320901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp82168 
End bp82944 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID640789005 
Producthypothetical protein 
Protein accessionYP_001325769 
Protein GI150395302 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.290223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AAGAAAATGC GCTTGCCTTC GAGGCACTGC ACCGGAAAGG CGATCCGGTG 
ATTCTGTACA ACATCTGGGA TGCGGGCAGC GCCCGCTGCG TGGCAGAGGC CGGCGCCAAG
GCGCTTGCCA CCGGGAGCTG GTCGGTCGCT GCGGCACACG GCTATACGGA CGGGCAGAAG
CTGCCGCTGC CTCTGCTGCT CGAGACCGTG CGCGAGATCG TCGCGGCAAC CGGCCTCCCG
CTCTCGGTGG ATTTCGAGGG TGCCTATTCG GAGGATCCGG CTCAGGCTGC GGCGAACGTC
GCGCAAATTA TGGATGCGGG GTGCATCGGG ATCAATTTCG AGGACCAGGT GATAGGAAAG
GGCGGTGTCC ATCCGATCGA CGGGCAGGCG GCTCGCGTCC GCGCAATCCG CGAAATGGCC
GAGCGACGGG GCGTTCGGTT GTTTATCAAC GCTCGCACCG ACCTCTTCCT GCAAGAGGGT
GATGCGGAGC GCCACACGGC ACTGATGGAG GACGCGATTG CCCGCGCCGA AGCCTATGCC
GATGCGGGCG CGAGTGGTTT CTTCGCGCCG GGGCTCGCCG ATGAGACCCT CATCGCCAGG
CTTTGCGCGG CTTCGCCTTT GCCTGTCAAC GTGATGATGA AGCCGGGAGC GCCGGATATC
GCCAGGCTTT CCGCTGCCGG CGTGGGGAGA GTGAGCTATG GACCGTTCCC TTATCGGGGC
ATGATGGCTT GGCTGCGCGG CGAGGCCGAG AAAGTCTATG CGAGCGCGGG GAAGTAG
 
Protein sequence
MSQEENALAF EALHRKGDPV ILYNIWDAGS ARCVAEAGAK ALATGSWSVA AAHGYTDGQK 
LPLPLLLETV REIVAATGLP LSVDFEGAYS EDPAQAAANV AQIMDAGCIG INFEDQVIGK
GGVHPIDGQA ARVRAIREMA ERRGVRLFIN ARTDLFLQEG DAERHTALME DAIARAEAYA
DAGASGFFAP GLADETLIAR LCAASPLPVN VMMKPGAPDI ARLSAAGVGR VSYGPFPYRG
MMAWLRGEAE KVYASAGK